Gene Information

Name : RPD_0417 (RPD_0417)
Accession : YP_567556.1
Strain : Rhodopseudomonas palustris BisB5
Genome accession: NC_007958
Putative virulence/resistance : Resistance
Product : GCN5-like N-acetyltransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 481803 - 482288 bp
Length : 486 bp
Strand : +
Note : -

DNA sequence :
GTGACCGGGATCTACCAATTTCGTCCGTTTACTGCCGACGACCTGCCGCTGATGGCGAGCTGGCTGAAGCGGCCGCACAT
GGCCGAATGGTGGGGCGATCCCGAGGAGCAACTCGCGGGGCTGCGGGAGGATCTCGATCAGCCGGCGATGGACCAGTATC
TGGTGATCACCGGCGGGACGCCGTTCGCCTATATGCAGTGCTACCGGCTCACGGCCTGGAATGACGGCTTCGGCCCGCAG
CCGGACGGCACCCGCGGCATCGACCAATCGATTGGCGATCCGGAGATGATCAACCGCGGCCACGGCTCCGCTTTCATTCG
CCAATTCACCGACGCCCTGCTGGCGGCCGGCACGCCGCGCATCGTCACCGACCCGTCGCCCGGCAATGGCCGCGCGATTC
GTTGTTACGAAAAAGCCGGCTTTCGCCGCGACCGCGTGGTCGACACCCCGGACGGCCCCGCTCTCCTGATGGTACAAGAA
ACATGA

Protein sequence :
MTGIYQFRPFTADDLPLMASWLKRPHMAEWWGDPEEQLAGLREDLDQPAMDQYLVITGGTPFAYMQCYRLTAWNDGFGPQ
PDGTRGIDQSIGDPEMINRGHGSAFIRQFTDALLAAGTPRIVTDPSPGNGRAIRCYEKAGFRRDRVVDTPDGPALLMVQE
T

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aacA4 CAB46687.2 aminoglucoside acetyl-transferase Not tested Not named Protein 7e-23 41
aacA4 ADZ05804.1 aminoglycoside 6'-N-acetyltransferase Not tested AbaR3 Protein 8e-24 41
aacA4 AET25388.1 aminoglycoside 6'-N-acetyl transferase type Ib Not tested PAGI-2(C) Protein 7e-24 41
aacA4 AFG30111.1 aminoglycoside 6'-N-acetyl transferase type Ib Not tested PAGI-2 Protein 7e-24 41
aacA4 ACY75533.1 aminoglycoside acetyl transferase Not tested Tn6060 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AY123251.gene5.p01 Protein 2e-27 43
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase Y18050.2.gene4.p01 Protein 3e-23 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AF024602.1.gene2.p01 Protein 3e-23 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AF315351.1.gene3.p01 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AF317511.1.gene4.p01 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AY033653.3.gene4.p01 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase EF118171.1.gene3.p01 Protein 3e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AY162283.2.gene2.p01 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AF371964.1.gene2.p1 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AF317511.1.gene3.p01 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AY033653.3.gene5.p01 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase GQ202693.1.gene3.p01 Protein 4e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AY123251.gene1.p01 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AF322577.2.gene3.p01 Protein 1e-24 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AM412777.1.gene2.p01 Protein 2e-25 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase FJ848783.1.gene2.p01 Protein 2e-25 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AJ584652.2.gene6.p01 Protein 2e-25 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AF231133.1.gene2.p01 Protein 2e-25 41
RPD_0417 YP_567556.1 GCN5-like N-acetyltransferase AY103455.gene.p01 Protein 1e-25 41