Gene Information

Name : RPD_0416 (RPD_0416)
Accession : YP_567555.1
Strain : Rhodopseudomonas palustris BisB5
Genome accession: NC_007958
Putative virulence/resistance : Unknown
Product : ATP-dependent protease peptidase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 481225 - 481806 bp
Length : 582 bp
Strand : +
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGAACATGTATTCCGCTTCGGGCGAAGGCTCGCCCCAAGGCTCCGCTCAGGTCTGGCACGGCACCACGATTCTCACCGT
CCGCAAGGGCGGCAAGGTAGTGATCGGCGGCGACGGCCAGGTCTCGATCGGCCAGACCGTGATCAAGGCCAATGCCAAGA
AGGTTCGCAAGCTCGGCAAGGGCGACGTGATCGGCGGCTTCGCGGGCGCCACCGCGGATGCCTTCACGCTGTTCGAGCGG
CTCGAAGCCAAGCTCGAACAATATCCGGGTCAATTGACCCGCGCCGCAGTCGAGCTCGCCAAGGACTGGCGCACCGACCG
CTATCTGCGGCGCCTGGAAGCGATGATGATCGTCGCCGACAAGGACGTCTCGCTGGTGCTGACCGGCACCGGCGACGTGC
TCGAGCCCGAATACGGCGTGATGGCGATCGGTTCCGGTGGAAATTATGCGCTCGCCGCGGCGAGGGCGCTGGCCGACACC
GACCAGGACGCCGAGACCATCGTCCGCAAGGCGCTCGATATCGCCGCCGACATCTGCGTCTACACCAACCGCAACCTGAC
GCTCGAGACGCTGTCCGCGTGA

Protein sequence :
MNMYSASGEGSPQGSAQVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFER
LEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEYGVMAIGSGGNYALAAARALADT
DQDAETIVRKALDIAADICVYTNRNLTLETLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 3e-25 52