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Name : RPD_3630 (RPD_3630) Accession : YP_570754.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : DEAD/DEAH box helicase-like protein Function : - COG functional category : R : General function prediction only COG ID : COG1204 EC number : - Position : 4049364 - 4052885 bp Length : 3522 bp Strand : + Note : - DNA sequence : ATGCCAACAACTCCTGAAACGATCGCTGCAGACATCGAGGAAGCTGCGACCGCCGGATTCCGAGGAAACCTACTTGCTCG CGGGCAGGCCCGCGCGATCATCTGGCGCGACGGTGCCCTGCCGGCCGAAGCGCCAGCCTTCGCCCCACAACTGAGCTACG ATCTCCATTCCTATGCCTATGCTCTTCTAGGGCTTGCTCTCCGTCTCCGTGAGATCGGCGGCGATGCGGCCCGGGCCCGG ATCGCGTTCGAGCAGGCGGCCACCGCCCTTGAAGCCGTAATCTCGAAAGGGGACCGTCAGGAGGTCGACCGAGACTTCCA CTTCGTGATGGCGGCAGCGAGCTATCATCTTGCGCATCTTTCGGCGCGCGCATATTCGCTTCTTGCGACCGTCGATGCCG ACGAGAATTTTTCGCGCATCGAAAGGGCGCTTGCACAGTTGATGCGGCGCAATTTCGAAGCCCTGCGTGCCGGTGTGCTC GATTACCGAGCTTCGGCGACGGGCTCCGATGCCCGGATTGCCGCCGAATTCCAGGCACGACTGGATCAGCCTGAAGGCGC CGGCGATCCAGAGGCCCGCGGCGAGTTCATCTTTGAGGGTCTGGACGTGGCCCTGACCGACGCATTCCTTTCGGCGATAT CAATGTTCGTTCTTGCACTGGACCGGGGTGACCGGTCGCTTGTAGATCAGGCGTTGGCCCGGCTCCGAGAAAACCTCTCG ATATGCAGCGAACTGAACCTCCTGCCGCAGTGGTGGGCGCACCGCCTGGCCATCCATCTCCTGTCCGACCTCTGGTCCAA TACTTTCCACGAAAGAGTTCCGCGCCAACCGACCGGGGGCGAAGCCGCTGACTGGCCACGCCTCCGGCAACTCTTCATCG CTCTGCTGCAGCGGCGACCCAAAGCCGAAATCGACCTGTGGCCGTCTCAGCTCGAAGCGGCGGAGCGCGCCGTCGATCAG GGCGACGACTTAGTGGTTTCCCTTCCGACGAGCGCAGGGAAGACACGGATCGCCGAGCTCTGCATTTTGCGGTGCCTGGC TGGCGGAAAACGTGTGGTTTTCGTGACGCCGCTTCGGGCACTTTCCGCTCAAACAGAAACGACACTGCAGAGAACTTTCG GTCCGTTGGGAAAGACGATTTCAGCCCTGTACGGTAGTATTGGTGTCAGCGGCTTCGACGAAGACGCTATTCGGGAAAGA GACATCGTTGTCTCGACCCCGGAAAAACTAGATTTCGCGCTCCGCAACGATCCTTCATTGCTCGACGATGTCGGACTTCT GGTCTTTGACGAGGGCCACATGATCGGCCCCAACGAGCGGGAGATACGGTATGAGGTTCAAATCCAGCGCCTCCTTCGGC GCCGAGACGCGCATGCACGCCGCATCGTTTGCCTTTCAGCGATACTTCCAGATGGCGACCAGCTCGACGACTTCGCTGCT TGGCTGCGGCGCGACCATCCGGGCGGCTTGATCAAGAATGACTGGCGGCCGACCCGACTGCGCTTCGGGGAAGTCATCTG GACCCCAGCTTCGGCATCGGCAAGGTTGAACCTGCGCGTCGGCGACGAGCGGCCTTGGGTGCAGCGCTTCTTGACCGGGG CCGCGCCGCCGCTTTTCATCCCGCCCAAGCGCTTGCGTACTAAAGTCTTTCCGGGAAATCAACGTGAACTCTGTCTCGCA ACAGCATGGCGGCTCGTCGAAGACGGGCAGACCGTCCTGATCTTCTGCCCCGAGCGGAGGGGCGTGGAGCCGTTCGCGGA CGTCGTCGTCGACCTGCATGAGCGCGGCGCTCTCCGCTCGTTGCTGGAGGTCGATCCAGGAGTGCTCAGCACGGCGATCA CGCTCGGCGAGGAGTGGCTAGGCCACGATAGCGCAATCTTGAAGTGCCTGCGCCTCGGCGTGGCGCTACATCATGGAGCG TTGCCGACCGCATATCGCAAAGAGGTCGAGCAGTTGCTGCGCGCGAACGTGCTCAAGGTCACCGTCTCGTCGCCTACGCT GGCGCAAGGCCTTAACCTTTCGGCCACGGCTGTGGTGATGTTCTCCCTCCATCGCGCCGGAGAGCTAATTGAGATCTCCG AATTCAAGAACGTCATCGGCCGAGCTGGCCGTGCTTATGTCGATGTGGAAGGGATCGTGCTCTTTCCGATGTTCGACGAG ATAGTGAAGAAGCGACGAAGCTGGGAAGCCCTCATCACTGATCTTGGCGCGCGTGAAATGGAGAGCGGACTTGTACGCCT CGTCAGCGCCCTCTTGTTGCGAATGCGCGCTCGGGTTGGCGGGGACCTGAATCAACTCATCGAATATGTGGTCAACAGCG CTGCAGCATGGGTCTTTCCGGAGGTACAGAATGAGACGCCCAAGGACCGTGAGCGTGCGCTCGCGGACTGGAATCGGCAC GTCGCGACGCTCGACACAGCCATCTTGAGCCTTATCGGCGAGAACGAAATCGCTGACCATGAAGTTGAGGCTGCGCTGGA CCACATACTGCAGTCCTCCCTCTGGCACCGCCGCCTTCTTCGCCAGAACGATCAGGTGCGGCACCTATTGAAGGCTGGCC TTCTCTCGCGTAGTCGACTCATCTGGAGTCAATCGACATCCACGCGTCGCCGGGGGTATTTCTTGGCCGGCGTCGGACTG ACTACCGGCCAAGCGCTCGATGCGATCGCGGCGGATGCCAACTTACTGCTGTTGCAGGCTAACGCCGGCATCGGCGCCGG CGACGCCGGCGCGGCGATCGATGCGGTCACTCGCCTCGCCGAACTGGTCTTCACGTTCTATCCGTTCACTCCCGATCCCT GGCCCGGCAACTGGCGCGACATACTCCGTTCCTGGTTGCTAGGCCAACCCCTTGGTGCGCTCGCCGCAGGCCAAGCTTCG GACACCCTCCAGTTCATCGAGGGAAGCCTCGTTTACCGTCTTCCATGGGCCATGGAAGCGGTGCGGGTCCGCGCGGCGGC GAACGGGGATACGGTCGGTTTGTTCGGTCTTACCCTCGAAGACCATGAGCTGAGCCTAGCTGTCCTCTCCGTGGAAACTG GCACGATGAATCGTTCGGCATCGATTCTCATCCAAGCAGGATTCACGTCGAGGCTGGCCGCGATCAAAGCGGTGACCGAT AGCGGCGCCACATTTCAGAACGGGGGACAGCTCCGAGCTTGGCTCAGCTCAGAGGCCTTGGCGGCATGGAACGCGCTGCC CGACTGGCCGACGGCTGAGACCAAAGCGATGTGGACCGAGTTCACTCAGGGATTCACTCCACGCGCGAGCAACATTTGGA GCGACCGCCGATACTGGGCAAGTGCCACTTGGTACGGCGTTCCGCCACTTCCGGGCGTGCCCGTGCAGCTTCACGATTGG AATGGTCAGCGGCTGGTGCTTTCAGCAGATTGTACGCCCTTGGGGACATTGCGGAATGCACTGAACGCGAACAGGAAAGG GCTCATTCAGGCAACGGTGTCACCGACCGCCGGAAGGATCGATCTGGTGTACATCGGGCCAGATGACCTCTCTGCGACCT AG Protein sequence : MPTTPETIAADIEEAATAGFRGNLLARGQARAIIWRDGALPAEAPAFAPQLSYDLHSYAYALLGLALRLREIGGDAARAR IAFEQAATALEAVISKGDRQEVDRDFHFVMAAASYHLAHLSARAYSLLATVDADENFSRIERALAQLMRRNFEALRAGVL DYRASATGSDARIAAEFQARLDQPEGAGDPEARGEFIFEGLDVALTDAFLSAISMFVLALDRGDRSLVDQALARLRENLS ICSELNLLPQWWAHRLAIHLLSDLWSNTFHERVPRQPTGGEAADWPRLRQLFIALLQRRPKAEIDLWPSQLEAAERAVDQ GDDLVVSLPTSAGKTRIAELCILRCLAGGKRVVFVTPLRALSAQTETTLQRTFGPLGKTISALYGSIGVSGFDEDAIRER DIVVSTPEKLDFALRNDPSLLDDVGLLVFDEGHMIGPNEREIRYEVQIQRLLRRRDAHARRIVCLSAILPDGDQLDDFAA WLRRDHPGGLIKNDWRPTRLRFGEVIWTPASASARLNLRVGDERPWVQRFLTGAAPPLFIPPKRLRTKVFPGNQRELCLA TAWRLVEDGQTVLIFCPERRGVEPFADVVVDLHERGALRSLLEVDPGVLSTAITLGEEWLGHDSAILKCLRLGVALHHGA LPTAYRKEVEQLLRANVLKVTVSSPTLAQGLNLSATAVVMFSLHRAGELIEISEFKNVIGRAGRAYVDVEGIVLFPMFDE IVKKRRSWEALITDLGAREMESGLVRLVSALLLRMRARVGGDLNQLIEYVVNSAAAWVFPEVQNETPKDRERALADWNRH VATLDTAILSLIGENEIADHEVEAALDHILQSSLWHRRLLRQNDQVRHLLKAGLLSRSRLIWSQSTSTRRRGYFLAGVGL TTGQALDAIAADANLLLLQANAGIGAGDAGAAIDAVTRLAELVFTFYPFTPDPWPGNWRDILRSWLLGQPLGALAAGQAS DTLQFIEGSLVYRLPWAMEAVRVRAAANGDTVGLFGLTLEDHELSLAVLSVETGTMNRSASILIQAGFTSRLAAIKAVTD SGATFQNGGQLRAWLSSEALAAWNALPDWPTAETKAMWTEFTQGFTPRASNIWSDRRYWASATWYGVPPLPGVPVQLHDW NGQRLVLSADCTPLGTLRNALNANRKGLIQATVSPTAGRIDLVYIGPDDLSAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70293.1 | helicase-like protein | Not tested | HPI | Protein | 0.0 | 66 |
