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Name : RPD_3530 (RPD_3530) Accession : YP_570654.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 3918634 - 3920271 bp Length : 1638 bp Strand : - Note : - DNA sequence : ATGGACGCCCTCAACCAGCCCTTGCTCTCCGTCGCCGATCTCTCCGTTGCCTTCCATCAGCAGAGCGGCACCACGCTCGC GGTGGATCGCATCTCGTATCAGATCAGGCGCGGCGAGTGCGTGGCATTGGTCGGCGAGTCCGGGTCGGGCAAATCGGTCA GCGCGCTGTCGATCCTGAAGTTGCTGCCGTATCCGACCGCGTCGCATCCGAGCGGGCAGATCCGGTTCAAGGGCCGCGAA CTGCTCGGCATGTCGGAGAACGACATCCGCGCTATCCGCGGCAACGAGATCTCGATCATCTTCCAGGAGCCGATGACCTC GCTCAATCCGCTGCACACGATCGAGGCGCAGATCGGCGAGATCCTGCAACTGCACGGCGGCCCGCGCGGCACCAAGGGGC GGGCGCGCATTCTGGAATTGCTGACGCAGGTCGGCATCCCCGAGCCGGAGACGCGGCTCGCCAGCTATCCGCACCAATTG TCCGGCGGCCAGCGCCAGCGCGTGATGATCGCGATGGCGCTCGCCAACGAGCCTGATCTCTTGATCGCCGACGAGCCGAC CACCGCGCTCGACGTCACCGTGCAGGCGCAGATCCTGGCGCTGCTCGCCGACATCCGCGCCCGGCTCGGCATGAGCCTAT TGTTCATCACCCACGATCTCGGCATCGTGCGGCGCATCGCCGACGTCGTCTGCGTGATGAACAACGGCAAGATCGTCGAG CAGGGGCCGGTCGAGCAGGTGTTCACCGCGCCGACCCACGCCTACACCAAGGCGCTGCTCGCCGCTGAGCCGAAGCCGGA TCCGGCGCCGCCACGGCCGGACGCGCCGGTGGTGATCTCCACCGACGATCTGAAAGTCTGGTTTCCGATCAAGCGCGGCC TGATGCGCAAGACGGTGGGCCACATCAAGGCGGTCGACGGTGTCACGCTCGCGGTGCGCAAGGGCGAAACCCTCGGCGTC GTCGGCGAGTCGGGCTCCGGCAAGACCACGCTCGGGCTGGCGCTGTTGCGGCTGATCTCGTCTGAAGGTCCGATCGTGTT CCTCAGCAGCAACATTCAGGGCCTGAAGTTCAAGGAGATGCTGCCGTTCCGCCGCGACATGCAGATCGTGTTTCAGGATC CGTTCGGCGCGCTCAGCCCGCGCATGTCGGTCGGCGATATCATCGCCGAGGGTCTCAGCGTGCATCAGCCGCATCTGTCG GAAGAAGAGCGCGAGGCGAGGGTGATCAAGGCGCTGAAGGAGGTCGGTCTCGATCCGGCGACGCGCTTCCGCTATCCGCA CGAATTCTCCGGCGGCCAGCGCCAGCGCATCAGCATCGCGCGTGCGGTGGTGCTGGAGCCGAATTTCGTCGTGCTCGACG AGCCGACCAGCGCGCTCGACATGTTGTTTCAGGCGCAGATGGTCGACCTGTTGCGCGAGCTGCAGCGCAAGCGCGATCTT ACTTACATGTTCATCTCGCACGATTTGCGGGTCGTCGCGTCACTCGCAAGTCATCTGATCGTGATGAAACAGGGCAAGGT CGTGGAGGAAGGCCCAGCGGCGGAGCTGTTCAAGCACCCGAAGACGGACTATACGCGGGCGCTGTTTGCCGCCGCGTTCC GGCTCGAAACCGCTCCGGGCGGCGCCGCCGCGCAATAG Protein sequence : MDALNQPLLSVADLSVAFHQQSGTTLAVDRISYQIRRGECVALVGESGSGKSVSALSILKLLPYPTASHPSGQIRFKGRE LLGMSENDIRAIRGNEISIIFQEPMTSLNPLHTIEAQIGEILQLHGGPRGTKGRARILELLTQVGIPEPETRLASYPHQL SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILALLADIRARLGMSLLFITHDLGIVRRIADVVCVMNNGKIVE QGPVEQVFTAPTHAYTKALLAAEPKPDPAPPRPDAPVVISTDDLKVWFPIKRGLMRKTVGHIKAVDGVTLAVRKGETLGV VGESGSGKTTLGLALLRLISSEGPIVFLSSNIQGLKFKEMLPFRRDMQIVFQDPFGALSPRMSVGDIIAEGLSVHQPHLS EEEREARVIKALKEVGLDPATRFRYPHEFSGGQRQRISIARAVVLEPNFVVLDEPTSALDMLFQAQMVDLLRELQRKRDL TYMFISHDLRVVASLASHLIVMKQGKVVEEGPAAELFKHPKTDYTRALFAAAFRLETAPGGAAAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-81 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-81 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-81 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-81 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-91 | 43 |
