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Name : RPD_3432 (RPD_3432) Accession : YP_570557.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3815473 - 3817398 bp Length : 1926 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACATCAGGTCGAACCCCGACACGACGCGCCCCGCCGTCACCACCGGCGGCCTGCCCTCCTCGAAGAAGATCTACGC GACGCCCGCCGCCGCGCCGGATCTGCGCGTACCGCTGCGCGAGATCATTCTGTCGGAAGGCGCCGGCGAGCCGAACCTGC CGATCTACGACACGTCGGGCCCCTACACCGACCCGAGCGTCACCATCGACGTCAATGCCGGCCTGTCGCGGGCCCGCACG CAATGGGTCAAGGAGCGCGGCGGCGTCGAAGAATATCAGGGCCGCGACGTCAAGCCGGAAGACAACGGCAATGTCGGCGC CGCGCATGCGGCGAAGTCGTTCACCGCCTATCACAAGCCGCTGCGCGGCATCGGCGACGCGCCGATCACCCAGTACGAAT TCGCCCGCCGGGGCATCATCACCAAGGAGATGATCTACGTCGCGGAGCGCGAGAATCTCGGCCGCAAGCAGCAACTCGAG CGCGCCGAGGCGGCGCTGGCCGACGGCGAGAGCTTCGGCGCCAGCGTGCCGGCGTTCATCACGCCGGAATTCGTCCGCGA CGAGATCGCGCGCGGTCGCGCCATCATCCCGGCCAATATCAACCACGGCGAACTCGAGCCGATGATCATCGGCCGCAACT TCCTGACCAAGATCAACGCCAATATCGGCAACAGCGCCGTGACGTCGTCGGTGGAGGAAGAAGTCGACAAGATGGTGTGG GCGATCCGCTGGGGCGCCGACACCGTGATGGACCTCTCCACCGGCCGCAACATCCACACCACCCGGGAATGGATCCTGCG CAACTCGCCGGTGCCGATCGGCACGGTGCCGATCTATCAGGCGCTGGAGAAGTGCGAAGGCGATCCCGTCAAGCTGACCT GGGAGCTGTACAAGGACACGCTGATCGAGCAGTGCGAACAGGGCGTCGATTACTTCACGATCCACGCCGGCGTGCGGCTG CAATACATTCACCTCACCGCCAATCGCGTCACAGGCATCGTCTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTCGC GCATCACAAGGAGAGCTTCCTCTACACGCATTTCGACGAGATCTGCGACCTGATGCGCAAGTACGACGTGTCGTTCTCGC TCGGCGACGGCCTGCGCCCGGGCTCGATCGCCGACGCCAACGACCGCGCCCAATTCGCCGAACTGGAGACGCTCGGCGAA CTCACCAAGATCGCCTGGGCCAAGGGCTGCCAAGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGAT CAACATGGACAAGCAGCTCAAGGAATGCGGCGAGGCGCCGTTCTACACGCTCGGGCCGCTGACCACCGACATCGCGCCGG GCTATGATCACATCACCAGCGGCATCGGCGCTGCGATGATCGGCTGGTTCGGCTGCGCGATGCTGTGCTACGTCACGCCG AAGGAACATCTCGGCCTGCCCGATCGCAACGACGTCAAGGTCGGCGTGATCACCTACAAGATCGCCGCCCACGCCGCTGA TCTGGCCAAGGGCCACCCCGCCGCGCAACTGCGCGACGACGCGGTGTCCCGCGCCAGATTCGATTTCCGCTGGCAGGACC AGTTCAACCTCGGCCTCGACCCCGACACCGCGCAGGCGTTCCACGACGAAACCCTGCCCAAGGACGCCCACAAGGTCGCG CATTTCTGCTCGATGTGCGGGCCGAAATTCTGCTCGATGAAGATCACCCAGGACGTGCGCGACTACGCAGCGGGATTGGG CGACAACGAGAAGGCCGCGCTGTATCCGGCCGGAAGCGTCGGGATGAGCATCAGCGGTGTGATCGAGGACGGCATGGCGC AGATGAGCGCGAAGTTCAGGGATATGGGCGAGCACCTGTATCTCGACGCCGAGAAGGTGAAGGAGAGCAACAAGGCGCTG TCGTAA Protein sequence : MNIRSNPDTTRPAVTTGGLPSSKKIYATPAAAPDLRVPLREIILSEGAGEPNLPIYDTSGPYTDPSVTIDVNAGLSRART QWVKERGGVEEYQGRDVKPEDNGNVGAAHAAKSFTAYHKPLRGIGDAPITQYEFARRGIITKEMIYVAERENLGRKQQLE RAEAALADGESFGASVPAFITPEFVRDEIARGRAIIPANINHGELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVW AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCEGDPVKLTWELYKDTLIEQCEQGVDYFTIHAGVRL QYIHLTANRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE LTKIAWAKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP KEHLGLPDRNDVKVGVITYKIAAHAADLAKGHPAAQLRDDAVSRARFDFRWQDQFNLGLDPDTAQAFHDETLPKDAHKVA HFCSMCGPKFCSMKITQDVRDYAAGLGDNEKAALYPAGSVGMSISGVIEDGMAQMSAKFRDMGEHLYLDAEKVKESNKAL S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 65 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 65 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 65 |
