|
Name : RPD_3098 (RPD_3098) Accession : YP_570225.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photolyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : 4.1.99.3 Position : 3441798 - 3443261 bp Length : 1464 bp Strand : + Note : - DNA sequence : ATGCCCAACAACACGCCCCGCCCCGTCATCGTTTGGTTTCGCGACGATCTGCGGCTGTCCGATCACCCTGCCCTGCATCA AGCTGCCGCATCCGGCGGACCGCTGATCTGCATCTACGTCTTCGACGAAGACAGCGCGCAGCTCCGCTCGCCGCAGGCCA GACCGCTCGGCGGCGCATCGCGCTGGTGGCTGGCGCAATCGCTGCGCGCGCTCGCTGCCAGTTTGGAGAAGCGCGGCGCG CGGCTGATCCTGCGCCGCGGACCGGCCGCCGCGATCATCGCCGAGCTGGCGCGCCAGGTCGACGCCAGCGCGGTGCACTG GAACGAGATCGAGATCGCGCCGCATCGCGCGGTCGCCGACGACCTCGCCGAAGCGTTGAGCGTCGCCGGGATCGATCACC ACCGCCATCGCGGCGATCTGCTCGCTTCGCCAGCGGAGGTGCGCACCAAAGAAGGCCGCGGACTGCGCGTGTTCACGCCG TTCTGGCGACGCGTGCTCGGCCTTGGCGATCCGCCGAAGCTGCTGCCGGCGCCGAAAACCCTGAGTGCCGCGCAAGGTCC GTCCGGCGATCAGCTTGATAGCTGGATGCTCGAGCCGACCGAACCGGACTGGGCCGGCGGCCTGCGCGAAAGCTGGACGC CCGGCGAAGGCGCCGCGCAAGACAACCTCACCGCATTCCTCGACGCCCTGCCCGGCTACACCGAAGGCCGCGACCGGCCC GACTGCGCTGCGACGTCGCGGCTGTCGCCGCATCTGCGGTTCGGCGAGATCAGCCCGCGTCAGGTCTGGTACGCGGCGCG GTTCGCCGCGGCGGAGCGGCCCGCGATCGCCGGCGACATCGACAAGTTCCTGAGCGAACTCGGCTGGCGCGAGTTCTGCC GGCATTTGCTGCACGATCATCCCGATCTCGCCGAGCGCAATCTGCAGGCCTCATTCGACGCCTTTCCCTGGATCACCGAC GCCGCCGCGCTGCACGCCTGGCAGCGCGGCTGCACCGGTTATCCGATCGTCGATGCGGGAATGCGCGAGCTCTGGCACAC CGGCGTGATGCACAATCGCGTCCGCATGGTGGTGGCGTCGTTCCTGGTGAAGCATCTGCTGATCGACTGGCGCTGCGGCG AGCAATGGTTCTGGGACACGCTGGTCGACGCCGATGCCGGCAGCAATCCGGCCAATTGGCAGTGGGTCGCGGGCTCCGGC GCCGATGCCGCGCCGTATTTTCGCGTGTTCAATCCCATCCTGCAGGGAGAAAAATTCGACCCGGCCGGCGACTATGTGCG TCGCTGGGTGCCTGAACTCGCCTCGCTTCCCGCTAAATTCATCCACCAGCCATGGACTGCGACGCCGTTCGAACTCGCAG CGGCGGGCGTCACACTCGGCGGCAATTATCCGGAGCCGATCATCGATCACCGGGTCGGACGCGAGCGCGCGCTTGCGGCT TACGCCAAAACGCGTCAGCATTGA Protein sequence : MPNNTPRPVIVWFRDDLRLSDHPALHQAAASGGPLICIYVFDEDSAQLRSPQARPLGGASRWWLAQSLRALAASLEKRGA RLILRRGPAAAIIAELARQVDASAVHWNEIEIAPHRAVADDLAEALSVAGIDHHRHRGDLLASPAEVRTKEGRGLRVFTP FWRRVLGLGDPPKLLPAPKTLSAAQGPSGDQLDSWMLEPTEPDWAGGLRESWTPGEGAAQDNLTAFLDALPGYTEGRDRP DCAATSRLSPHLRFGEISPRQVWYAARFAAAERPAIAGDIDKFLSELGWREFCRHLLHDHPDLAERNLQASFDAFPWITD AAALHAWQRGCTGYPIVDAGMRELWHTGVMHNRVRMVVASFLVKHLLIDWRCGEQWFWDTLVDADAGSNPANWQWVAGSG ADAAPYFRVFNPILQGEKFDPAGDYVRRWVPELASLPAKFIHQPWTATPFELAAAGVTLGGNYPEPIIDHRVGRERALAA YAKTRQH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 6e-71 | 43 |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 5e-70 | 42 |
