|
Name : RPD_2720 (RPD_2720) Accession : YP_569850.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : acyl-CoA synthetase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG0318 EC number : 2.3.1.86 Position : 3035808 - 3037457 bp Length : 1650 bp Strand : - Note : activates fatty acids by binding to coenzyme A DNA sequence : ATGAGCTCCCCGCAAGGTCACTACAGCATCGGGCTGGACAAGACGCCGGCGAATTACGTGCCGCTGTCGCCGCTGAGCTT CCTGGAGCGCACCGCCAACGTCTATCCGGACCTGACCAGCGTGGTCTATGAGGGCCGGCACTACACCTGGAAGGAAACCC GCGCGCGCTGCCGCCGCTTCGCCTCCTGGCTCGTGCGCAACGGCATCGGCCGTGGCGATACGGTGGCGGCGATGCTGCCG AACGTGCCGGCGATGGTCGAGGCGCATTTCGCCGTGCCGATGGCCGGCGCCGTGCTGAACGGGCTGAACATCCGGCTCGA CGCCCCGGCGATCGCCTTCCAGCTCGAGCATGGCGGCGCCAAGATCATCCTGGTCGACCCGGAATTCGCCGCGGTGATCG CCGACGCGCTGAAACAGATGAAGGGTCCGAAGCCGCTGGTGATCGATGTCGATGACAAAATGTTCCCCGGCAGCCACCGC ATCGGCGAGCTCGAATACGAATACGCCGTCGCCTCGGGCGACCCGTCATTCGCAGGCGAGCGGCCGAAGGACGAGTGGGA CGCGATCGCGCTCGGCTACACCTCGGGCACCACGGGCAACCCGAAGGGCGTGGTGACCCATCATCGCGGCGCCTATCTCA ATGCGGTCAGCAACATCCTCGCGGCCAATCTCGGCGCGCATCCGGTGTATCTGTGGACGCTGCCGATGTTTCACTGCAAC GGCTGGTGCTTCCCCTGGACGATGGCCGCGGCGGCGGGCGTCAATGTCTGCCTGCGCAAGGTCGATCCCGCCAAGATCTT CGACCTGATCCGGCGCCACGGCGTCACTCACATGGCCGGCGCGCCGATCGTCTACAACGCGCTGATCAATGCACCCGAGG CGCCGAAGGGCGCGGCTGCGCGTCCGGTGGTCGGCCTGATCGCGGGTGCGGCGCCCCCGGTCGCGGTGCTGGCCGGCGGG GAATCGATCGGCATCAAGCTGACCCACGTCTATGGCCTCACCGAAGTCTACGGCCCCGCCTCGGTCTGCGCCGAGCAGCC CGGCTGGGACGATCTCAGCGTCGCTGATCGCGCCCAGCTCAAGCGCCGGCAGGGCGTGCCCTACCCGCTGCAGGAAGCCG TCACCGTGCTCGATCCCGAGACGATGCAGGAAGTGCCGCGCGACGGCGAGACCATCGGCGAGGTGATGTTCCGCGGCAAC ATCGTGATGAAGGGCTATCTGAAGAACGAGAAGGCGACCAAGGAAGCGCTCGCCGGCGGCTGGTTTCACACCGGCGATCT CGGCGTGCTCGATCCGCACGGCTACGTCATCATCAAGGACCGCTCCAAGGACATCATCATCTCGGGCGGCGAGAACGTCT CATCCGTCGAGGTCGAGGACGTGCTCTACAAGCACCCGGCGATCCTGTTCGCCGCGGTGGTCGCCAAGCCAGACCCGAAA TGGGGCGAAGTGCCCTGCGCCTTCGTCGAACTGAAGGAAGGCGCTAGCGCCACCGAGGCCGAGATCATTTCCTATTGCCG CGAACACCTGCCCGGTTTCAAGACGCCGAAGAGCATCATGTTTTCGGCCATCCCGAAGACCTCGACCGGCAAGATCCAGA AATTCATGCTGCGCGATCAGGTGAAGTCGGCGAAGGCGATTTCGGACTAA Protein sequence : MSSPQGHYSIGLDKTPANYVPLSPLSFLERTANVYPDLTSVVYEGRHYTWKETRARCRRFASWLVRNGIGRGDTVAAMLP NVPAMVEAHFAVPMAGAVLNGLNIRLDAPAIAFQLEHGGAKIILVDPEFAAVIADALKQMKGPKPLVIDVDDKMFPGSHR IGELEYEYAVASGDPSFAGERPKDEWDAIALGYTSGTTGNPKGVVTHHRGAYLNAVSNILAANLGAHPVYLWTLPMFHCN GWCFPWTMAAAAGVNVCLRKVDPAKIFDLIRRHGVTHMAGAPIVYNALINAPEAPKGAAARPVVGLIAGAAPPVAVLAGG ESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLSVADRAQLKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGN IVMKGYLKNEKATKEALAGGWFHTGDLGVLDPHGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDPK WGEVPCAFVELKEGASATEAEIISYCREHLPGFKTPKSIMFSAIPKTSTGKIQKFMLRDQVKSAKAISD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01500.1 | AMP-binding protein domain | Not tested | PAGI-1 | Protein | 1e-120 | 52 |
