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Name : RPD_2620 (RPD_2620) Accession : YP_569750.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Resistance Product : DEAD/DEAH box helicase-like protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2934249 - 2936432 bp Length : 2184 bp Strand : - Note : - DNA sequence : ATGTCAGCCCGCGTCGGTGCATTGCAATTGCCGCAAAATGCATCCAAGCCTGCGCTGCGTCACCCACCAGTCCGAGCCGG TTCGATGCGTCCCGCTTTGCTCAATCCCCTGTTTGCGTCCATCACCACCCTGCCCGGGGTCGGTCCGAAGCAGGACAAGC TGTTTCGCTATCTGCTCGGGCGAAGCGAGACCCCGCGGCTGGTCGACCTCTTGCTGCACCTGCCGGTCAGCGTGATCGAC CGCCGCTCCCGGCCCAAGATCCGCGACGCCGAGCCCGGCACCGTGGTGACGCTGGAAGTCCATGTCGACCGCCATCGTCC GCCGCCGCCCGGTCGCTCGCGCGCGCCCTATCTGGTCTATGCCAGCGACGACACCGGCGACGTGATCCTGACGTTCTTCA GGGCCAAAGCGGACTACATCGAGAAATTGCTGCCCATCGGCGAGAAGCGCTACATCTCTGGTACGGGCCAACTGTATGAC GGCACGCTGCAGATCGTGCACCCGGATCGCGTCGTCGACGAAGCCGGCTTCGCCAAGCTTCCGAAGATCGATCCGGTCTA TCCGCTGACCGAGGGGCTCGCGATCGGCTCGCTGCGCCGCGCAGAGGCGCAGGCGCTGACCAAGCTGCCGGCGATGCCCG AATGGATCAGCCCGGAGGTGCTGCGGCGCTGCCGGTTTCCGTCGTTGGCCGACGCCCTGAATCGGGTTCATGTGCCGGTT GAACCGACCGACATCCTGCCGGACGGGCCGTATTGGTCCCGCCTCGCTTATGACGAACTGCTCGCCGGCCAGCTCGCTCT GGCGCTGGTGCGGGCGCAGCTTCGACGTCCTGCAGGTACGCGCAACGCCGGGGACGGCAGGCTGCGGCACAAGATCATCG ACGCGCTGCCCTATTCGCTGACCGCCTCGCAGCAGGAGGCCGCCGCCGCGATCGCCGAGGACCTGCGCCAGCCGGTCCGG ATGCTGCGGCTGCTGCAGGGCGACGTCGGCTCCGGCAAGACCGTGGTCGCTCTGCTCGCGGCCGCCGCCGTCACCGAGGC CGGCAAGCAGGCGGCGCTGATGGCGCCGACCGAAATCCTCGCGCGCCAGCACATCAAGACCATCGCTCCGCTCGCCGAGC GCGCCGGGCTCAGCGTCGCGATCCTGACCGGCCGTGAAAAGGGCAAGGAGCGCCGCGACCTGCTGGCGCGCCTCGCCGCC GGCGAGATCGATTTTCTGGTCGGCACTCACGCGCTGATCCAGGATGACGTCGTGTTCAAGTCGCTGGCGCTGGCGGTGGT CGACGAGCAGCACCGTTTCGGCGTCCGCGAGCGACTGGCGCTGACCTCGAAGGGCGACACCGTCGACGTCTTGGTGCTGA GCGCCACACCGATCCCGCGCACGCTGGTGCTGACCTATTTCGGCGACATGGACGTCTCAGAACTGCGCGAGAAGCCGGCC GGGCGTCAACCGATCGACACCCGGGCTTTGTCCGACGGTCGCCTGCCCGAAGTGATCGACGCCGTCGGCCGCGCAGTGAC CGCCGGCAAACGCGTTTACTGGATCTGCCCGCTGGTCGAAGAATCCGAGAACGTCCGGCTCACCGATGCCGAGCAGCGTT TCGAAAGCCTGCAACAACGTTTCGGCGACAAGGTCGGCCTGGTCCACGGCCGGATGCGTGGCGCCGACAAGGATCGCGTG ATGGCGCAGTTCGCCAGCGGCGAGATCAGCGTGCTGGTCGCAACCACAGTGGTCGAAGTCGGCGTCGACGTGCCCGCCGC CACCATCATGGTGATCGAGAACGCCGAGCGCTTCGGACTGGCGCAACTGCATCAGTTGCGCGGCCGCGTCGGCCGCGGCA GCGAGGCCTCGACCTGTCTGCTGCTGTACCGCGAACCGCTCGGCGAGATGTCGGCTGCGCGGCTGCGGGTGATCCGGGAG ACGACCGACGGTTTTCGGATCGCCGAGGAGGATTTGAAGCTCCGCGGCGAAGGCGACGTCCTCGGGACCCGCCAGAGCGG CCTGCCCGGCTACCGGATTGCGCGCTCCGATGTGCACGGCCAGCTCATCACTCAGGCCCGCGACGAAGCGCTGCGCATCA TGAAAGACAATCCGAAGCTCGAAGGCGCTTCGGGCGAAGCGCTGCGTTGCCTGCTGTATCTCTACGAACGCGATGAAGCA CTGCCGCTGATCGGCGCGGGGTAA Protein sequence : MSARVGALQLPQNASKPALRHPPVRAGSMRPALLNPLFASITTLPGVGPKQDKLFRYLLGRSETPRLVDLLLHLPVSVID RRSRPKIRDAEPGTVVTLEVHVDRHRPPPPGRSRAPYLVYASDDTGDVILTFFRAKADYIEKLLPIGEKRYISGTGQLYD GTLQIVHPDRVVDEAGFAKLPKIDPVYPLTEGLAIGSLRRAEAQALTKLPAMPEWISPEVLRRCRFPSLADALNRVHVPV EPTDILPDGPYWSRLAYDELLAGQLALALVRAQLRRPAGTRNAGDGRLRHKIIDALPYSLTASQQEAAAAIAEDLRQPVR MLRLLQGDVGSGKTVVALLAAAAVTEAGKQAALMAPTEILARQHIKTIAPLAERAGLSVAILTGREKGKERRDLLARLAA GEIDFLVGTHALIQDDVVFKSLALAVVDEQHRFGVRERLALTSKGDTVDVLVLSATPIPRTLVLTYFGDMDVSELREKPA GRQPIDTRALSDGRLPEVIDAVGRAVTAGKRVYWICPLVEESENVRLTDAEQRFESLQQRFGDKVGLVHGRMRGADKDRV MAQFASGEISVLVATTVVEVGVDVPAATIMVIENAERFGLAQLHQLRGRVGRGSEASTCLLLYREPLGEMSAARLRVIRE TTDGFRIAEEDLKLRGEGDVLGTRQSGLPGYRIARSDVHGQLITQARDEALRIMKDNPKLEGASGEALRCLLYLYERDEA LPLIGAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-145 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPD_2620 | YP_569750.1 | DEAD/DEAH box helicase-like protein | BAC0356 | Protein | 4e-91 | 43 |
