Gene Information

Name : RPD_2105 (RPD_2105)
Accession : YP_569241.1
Strain : Rhodopseudomonas palustris BisB5
Genome accession: NC_007958
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 2356324 - 2357115 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGACGCCCCGCCAATGATCGCCTATACCCGCGTCGACAAGACTTTCGGCGGCGGCCGGATCAGAGCGGTCGATGG
CGTGTCGCTGAGCGTCGCGCGTGGCGAGTTCCTCGCGATCGTCGGCGGCTCCGGCTCCGGCAAGACCACGCTGCTGCGCC
TCGCGAACCGGCTGATCGACGCCGACGCCGGCTCGATCGCGATCGAGGGCGCAGACGTCCGCAGCACCGACCCGATCGTG
CTGCGACGCCGGATCGGAACCGTGTTCCAGGCCGGCGCGCTGTTCCCGCACCTCACCGTCGCCGGCAATATTGGGATCAC
GCCGAAGCTGCTCGGCTGGCCCGAAGCCAAGATCGCAGCTCGGGTCGACGAACTGCTCGATCTGGTGCGGCTCGATCGCG
CGCAGCATCGCGGGCGCTTTCCGCACGAACTCTCCGGGGGCCAGCGCCAGCGCGTCGGCGTCGCCCGCGCGCTCGCGGCA
AAACCCAGCATCGTGCTGATGGACGAACCGTTCGGCGCGCTCGATCCCTTGACCCGCGATGCGCTCGGCGACGACTTCCG
CGCGCTGCACGACCGGCTCGGGCTGACCACGATGCTGATCACCCACGACATCACCGAGGCACTGCTACTCGCTGACCGCA
TCGCGGTGATGCGCGCAGGACAATTGATCGCACAGGGCGCCGCTGCCGAGCTGGCGCATAGCACCGATCCCTATGTCGCC
GAATTACTCCAGACGCCGCGCCGGCAGGCGAAGCGCCTCGGCGAATTGCTGCCGCGGGACGCCGGGGCATGA

Protein sequence :
MSDAPPMIAYTRVDKTFGGGRIRAVDGVSLSVARGEFLAIVGGSGSGKTTLLRLANRLIDADAGSIAIEGADVRSTDPIV
LRRRIGTVFQAGALFPHLTVAGNIGITPKLLGWPEAKIAARVDELLDLVRLDRAQHRGRFPHELSGGQRQRVGVARALAA
KPSIVLMDEPFGALDPLTRDALGDDFRALHDRLGLTTMLITHDITEALLLADRIAVMRAGQLIAQGAAAELAHSTDPYVA
ELLQTPRRQAKRLGELLPRDAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-40 46
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-41 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPD_2105 YP_569241.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-16 41