Gene Information

Name : RPD_0113 (RPD_0113)
Accession : YP_567254.1
Strain : Rhodopseudomonas palustris BisB5
Genome accession: NC_007958
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 126781 - 127566 bp
Length : 786 bp
Strand : -
Note : -

DNA sequence :
ATGCTGGTGCTCGATGGCCTCGACAAGACCTATCCCAACGGCGTGCACGCGCTCGAGCGGTTCTCGGCGCAAATCCAGCT
CGGCGAGATCATCGCCATCATCGGCGGCTCCGGTTGCGGCAAGTCCACGCTGCTCCGCGCGATCGCCGGGCTCGATCGCG
CCAGCGCCGGCGCGATCACGCTGGACGGCGAGACCATTGCGGCGCCGCATCCCAAGATCGGCATCATCTTCCAGGAGCCG
CGGCTGCTGCCCTGGCTCAGCGTTGCCGACAATATCGGCTTCGGCCTCGACGGCGTGCCGCGGCGGCAGCGAGCGGGTCG
CGTCGCGGCGGCGCTGTCGCGGGTCGGGCTGTCCGACAAGGCCAAAGCGTGGCCGCGCGAACTCTCCGGCGGGCAGGCGC
AGCGGGTCGCGATCGTGCGCGCGCTGGTGCCGCAGCCGGAAGTGCTGCTGCTCGACGAGCCGTTCTCGGCGCTCGACGCC
TTCACCCGCCGCGATCTGCAGGACCATCTGCTCGACCTCTGGGCCGATACGCGGCCGACGCTGATCCTGGTCACCCATGA
CGTCGAGGAGGCGGTGGTGCTGGCCGACCGGGTGCTGGTGATGCGGCCCCGACCGGGGCGGCTGTTCGAGGAGATCGCGG
TCGATCTGGCGCGGCCGCGCGACCGCAATTCGCCGCTGTTCGAGACCCTCAGGCACCGGGTCTACAGCTCGCTCGACCGT
TCGCTGGACCTTGCGCAGCCGGGGGCGGAGGCGAAAGTGAACGTCGGCGACGCGATGTGGTGGTGA

Protein sequence :
MLVLDGLDKTYPNGVHALERFSAQIQLGEIIAIIGGSGCGKSTLLRAIAGLDRASAGAITLDGETIAAPHPKIGIIFQEP
RLLPWLSVADNIGFGLDGVPRRQRAGRVAAALSRVGLSDKAKAWPRELSGGQAQRVAIVRALVPQPEVLLLDEPFSALDA
FTRRDLQDHLLDLWADTRPTLILVTHDVEEAVVLADRVLVMRPRPGRLFEEIAVDLARPRDRNSPLFETLRHRVYSSLDR
SLDLAQPGAEAKVNVGDAMWW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 9e-42 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPD_0113 YP_567254.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-24 41