|
Name : RPD_1052 (RPD_1052) Accession : YP_568191.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1205398 - 1207413 bp Length : 2016 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : TTGAACATCTCTGCACGCGATATCCACGACGAAGTCAGCCACGGCGAAATGGCCAATGCGGTCCGCTTCCTCGCGATCGA CGCAGTCGAAAAGGCGAAGTCCGGCCACCCCGGAATGCCGATGGGCATGGCCGACGTCGCCACCGTGCTGTTCACCCGCT TCATGAAGTTCGATGCCGCCGATCCGACCTGGCCCGACCGCGATCGTTTCGTGCTGTCGGCCGGCCATGGCTCGATGCTG CTCTACGCGCTGCTGCATCTGACCGGCTACAAAGAGGTCACGATCGATGAGTTGAAGGCGTTCCGGCAGTGGGGCTCGAA GACGCCCGGCCATCCGGAATACGGCCACACCGAAGGCGTCGAGACCACCACCGGCCCGCTCGGGCAGGGGCTCGCGACCT CGGTCGGCATGGCGCTCGCCGAGCGGATGCTGAACGCGCGTTACGGCGATGCGCTGGTCGATCACTTCACCTATGTGATC GCCGGCGACGGCTGCCTGATGGAAGGCGTCAGCCACGAGGCGATCTCGCTCGCCGGTCATCTCAAGCTCAATCGCCTGAT CGTGCTGTGGGACGACAACCACATCTCGATCGACGGCGAAACCTCACTGTCGTGCTCGGATGATCAGCTCGCGCGCTTCG CCGCGTCGGGCTGGGCCACCACCCGCGTCGATGGCCATGATCCGGAGGCGGTCGAGGCCGCGATCGAGCAGGCCAGGAAA AGCGACCGGCCGTCCCTGATCGCCTGCCGCACCAAGATCGGCTTCGGCTCGCCCAAGGTCGAGGGCACCGAGAAAGCCCA TGGCGCGCCGCTCGGCGCCGACGAGGTCGAGAAGACCCGCGCTGCGCTGAACTGGCCGCACCCTCCGTTCGAAGTGCCGG ACGCGGTTCTTGCGCGCTGGCGCGAGGCGGGCAGCCGCGGCAAGGCCGCGCATCAGGCGTGGACCGAGCGGCTCGGCAAT CTCGATGCGGCGACCCGCGCCGGCTTCGAGAACGTCCTCGCCGGCAAGCTGTCGGCCGACTACGAGCCCGCGCTGAAAGC GCTGATCGCGAATTTCGCATCCGACCAGCCGTCGATCGCCACCCGGCAGGCTTCGCAGCTCACCATCAACGCGCTGGTGC CGGCGTCGCCGAACCTGCTCGGCGGCTCGGCTGACCTGACCCATTCCAACCTGACCCACGCCAAGGGTTCGGTTTCGGTG AAGCCCGGCGCCTATGGCGGCAGCTATCTGCACTACGGCATTCGCGAATTCGGCATGGCGGCGGCGATGAACGGCCTCGC CCTGCACGGCGGCTTCATTCCCTATGGCGGCACCTTCCTGGTGTTCGCCGACTACAGCCGTCCGGCAATACGGCTCGCGG CGCTGATGGGGGTGCGGGTGATCCATGTGATGACCCACGACTCGATCGGCCTCGGCGAGGACGGCCCGACCCATCAGCCG GTCGAGCATGTCTCGTCGCTACGGGCGATCCCGAACCTGCTGGTGTTTCGTCCGGCGGACGCGATCGAGACCGCGCAGGC CTGGGACTGCGCGCTGAAGCAGGCGAGCCGGCCCTCGGTGCTGGCTCTGTCGCGGCAGGCGCTGCCGATGTTGCCGCGGC CGAACGGCGTGAACGACAATCCGGTCGGGCGCGGCGCCTACCTGGTGATCGATCCGGGCAAGCGCGACGTCACTTTGATC GCGACCGGCTCGGAAGTCTCGCTGGCGCTGGAAGCGGCGTGCAAGCTCGAGGGCGAAGGCATCAAGGCGGCGGTGGTCTC GGCGCCCTGTTTCGAATTGTTCGCCGAACAGGACGAGGCCTACCGCGCGACCGTGCTTGGGACTGCGCCGCGGATCGGCG TCGAAGCGGCGCGCGATATCGATTGGCGGCGTTGGATCGGCGATGGCGGCGCCTTCGTCGGCATGACCGGGTTCGGCGCC TCGGCGCCGGCGCCGGTGCTGTACCAGAAGTTCGGTATCACCGCAGATGCGGTCACGGACGCGGCCAAGGCCGCGATCGC TCGCAGCAAACATTGA Protein sequence : MNISARDIHDEVSHGEMANAVRFLAIDAVEKAKSGHPGMPMGMADVATVLFTRFMKFDAADPTWPDRDRFVLSAGHGSML LYALLHLTGYKEVTIDELKAFRQWGSKTPGHPEYGHTEGVETTTGPLGQGLATSVGMALAERMLNARYGDALVDHFTYVI AGDGCLMEGVSHEAISLAGHLKLNRLIVLWDDNHISIDGETSLSCSDDQLARFAASGWATTRVDGHDPEAVEAAIEQARK SDRPSLIACRTKIGFGSPKVEGTEKAHGAPLGADEVEKTRAALNWPHPPFEVPDAVLARWREAGSRGKAAHQAWTERLGN LDAATRAGFENVLAGKLSADYEPALKALIANFASDQPSIATRQASQLTINALVPASPNLLGGSADLTHSNLTHAKGSVSV KPGAYGGSYLHYGIREFGMAAAMNGLALHGGFIPYGGTFLVFADYSRPAIRLAALMGVRVIHVMTHDSIGLGEDGPTHQP VEHVSSLRAIPNLLVFRPADAIETAQAWDCALKQASRPSVLALSRQALPMLPRPNGVNDNPVGRGAYLVIDPGKRDVTLI ATGSEVSLALEAACKLEGEGIKAAVVSAPCFELFAEQDEAYRATVLGTAPRIGVEAARDIDWRRWIGDGGAFVGMTGFGA SAPAPVLYQKFGITADAVTDAAKAAIARSKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-153 | 52 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-146 | 50 |
