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Name : Mbur_1213 (Mbur_1213) Accession : YP_565885.1 Strain : Methanococcoides burtonii DSM 6242 Genome accession: NC_007955 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1300748 - 1303972 bp Length : 3225 bp Strand : - Note : - DNA sequence : ATGACCGAATCCGCCATTGAGGAATTCGCCATCGAACTCCTCGAACATCAGGGCTACCAGTATATCTATGCCCCGGACAT TACCCCGGATAGCGACACTCCGGAACGGGAACGGTTTGAAGATGTACTATTATCAGAGCGCCTGCGAAAATCCATTGGCA GGATCAATCCCACTATTCCGGCAGATGCGCGGGAGGACGCCATCAGGCAGATACAGCGCCTTAATTCGCCTGAACTTATC GCCAACAACGAGGCATTTCACAGGATGCTTACCGAGGGCATAAAGGTAAGTTATCAGAAAGACGGAGCCGACAGGGGCGA TCTGGTCTGGCTCGTAGATTTTAACGATCCTGAAAACAACGAATTTCTTGTCACCAATCAATTCACTGTCATTGAAAATA ATGTGAACAAACGGCCTGATATCATCCTTTTTGTTAACGGTCTGCCCCTGGTGGTTATCGAGCTGAAAAACCCTGCTGAC GAGAACGCAACCGTAAGATCTGCATTCAGACAGTTGCAGACCTACAAACAGGCAATTTCATCTTTGTTTGCCTATAATGG TTTCATGGTCATCTCCGATGGTCTGGAGGCAAAATCAGGTTCTCTTTCCGCTGGTTTCAGCCGTTTTATGGCATGGAAAA GCTCAGACGGCACGGTTGAAGCCTCGCCTTTAATTGGTCAGTTGGAAACACTCATTAACGGGATGCTGAATAAAACAACT CTCTTGGATCTTGTCCGGCATTTCATTGTATTTGAAAAATCGAAAAAGGAAGACAGGACAACCGGCATTATAACTATTCA GACTGTAAAGAAACTCGCTACCTATCATCAGTACTATGCCGTTAACCGGGCGGTAGAATCGACACTCAGGGCATCGGGTT ATGCTGCGGCGAAAGACTGGCAAATTTTCGGTCTACATCATGAGAGTCCCGAAAGTTATGGCTTGCCCGGGGTGACAGAA CAACCCATTGGAGACAGAAAAGGCGGCGTGGTCTGGCATACACAGGGAAGTGGTAAATCCCTTTCCATGGTTTTCTACAC CGGTAAGATCGTCCTGGCAATGGATAACCCCACCGTAGTTGTGATCACTGACAGAAACGACCTGGACGACCAGCTTTTTG ATACCTTTGCCGCTTCAAAGCAACTTCTCAGGCAGGAACCTGTGCAGGCAGAAAACAGGGGGCATTTGAAAGAACTGCTA AACGTTGCATCGGGTGGCGTGGTATTTACCACCATCCAGAAATTCCAGCCCGAAGAAGGGAACGTTTACCCGAAACTATC GGACAGGAGAAATATCATTGTGATAGCTGACGAAGCCCACCGGACACAATACGGCTTCAAGGCAAAAACCATTGATATCA AGGATGAACAGGGAAACGTAATCGGTCAAAAGATCGTTTACGGTTTTGCGAAATACACACGCGACGCCCTGCCCAACGCA ACTTACCTGGGTTTCACCGGTACGCCAATAGAAAAAACAGACGTGAACACGCCTGCTGTTTTTGGCAATTATGTTGACAT TTATGATATATCCCAGGCTGTTGAGGACGGCGCCACGGTAAAAATCTATTACGAAAGCAGGTTGGCAAAAATCATTCTCA GCAAGGAAGGTAAAAAACTGGTCTCAGAACTGGATGAAGAACTGGAAAAAGAAAATCTTGCAGAAACCCAGAAAGCCAAA GCTAAATGGACACAACTGGAAGCCTTGATCGGCAGTGAAGGCCGAATAAGGCAGATCGCACAGGATATTGTAACTCATTT CGAGCAAAGAAAGGAAGTGTTCGAAGGCAAGGGAATGATCGTTGCAATGTCACGAAGGATAGCCGCTGACCTGTACGATG AAATTATCAAGATCAAGCCGCAATGGCACAACGATGACTTTAAAAAAGGCGAAATCAAGATTGTGATGACCTCTGCATCT TCTGACGGGCCCAAAATATCAAAACATCATACGACAAAAGAGCAGAGAAGAGCTTTAGCAGAACGGATGAAAGACCCGGA AGACGAATTGAAACTGGTCATCGTTCGGGACATGTGGCTAACGGGTTTTGATGTTCCATGTCTGCATACGATGTACATTG ACAAGCCAATGAAAGGGCATACCCTTATGCAGGCAATTGCGCGGGTGAACAGAGTCTATAAAGACAAACCAGGTAGTCTG GTTGTTGATTATCTGGGAATAGCTTCTGACCTGAAAGAAGCCTTGTCTTTCTATTCTGACAGCGGCGGGAAAGGCGATCC TGCTGTCCTTCAGGAGAGTGCAGTTCAATTGATGCTGGAGAAACTGGAGATCGTATCCCAGATGTTTCATGGATTTTCCT ACGAACATTACTTTGCAGCGGATACTTCTACGAAGTTGTCAATAATACTTGCAGCAGAAGAACATATTCTGGGTCTCGAA AACGGTAAAAAAAGGTACATCGATGAAGTAACTGCATTATCAAGAGCATTTTCCATAGCCATTCCACACGAGGAGGCAAT GGATGTGAAGGATGAAATCTCGTTTTATCAAGCGATAAAAGCCAGACTTGTTAAATTTGACAGCACTGGAACAGGTAAAA CAGACGAGGAGATTGAAACTGCAATCAGACAGGTTATCGATCAGGCCCTTGTTACTGAACAAGTGATAGACGTGTTTGAT GCCGCAGGAATTAAAAAACCGGACATTTCCATATTATCAGAAGATTTTCTTTTAGAAGTCCAGAACATGGAACACAAAAA TATAGCTCTGGAAGTTCTAAAAAAGTTGCTCAACGATGAAATAAAAGCCCGGGTAAAGAAGAACCTCGTTCAAAGCAAAT CATTAATGGAAATGCTGGAAGATTCCATCAAGAAATATCATAACAAAGTTATAACTGCGGCTGAAGTCATTGAAGAATTG ATTGAACTCAGTAAAGAGATAAAACGGATGGACAAAGAACCTTTAGAGATGGGTTTGTCTGAATTTGAATATGCGTTTTA CACAGCAATCGCAGATAATGACAGTGCAAGAGAATTGATGCAAAAAGAGAAGTTACGGGAACTAGCGGTTGTTTTATTTG ATAAAATCAAACAAAACGCGTCTATAGACTGGACGATTAAAGAAAGCGTCAGGGCCAAATTAAAAGTAATTGTAAAACGG ACATTAAGACAATATGGCTATCCGCCGGATCTACAAGCACTCGCTACAGAAACAGTGCTTAAGCAGGCGGAATTGATCAC CGATGAAATAACAAAGGGTGTTTGA Protein sequence : MTESAIEEFAIELLEHQGYQYIYAPDITPDSDTPERERFEDVLLSERLRKSIGRINPTIPADAREDAIRQIQRLNSPELI ANNEAFHRMLTEGIKVSYQKDGADRGDLVWLVDFNDPENNEFLVTNQFTVIENNVNKRPDIILFVNGLPLVVIELKNPAD ENATVRSAFRQLQTYKQAISSLFAYNGFMVISDGLEAKSGSLSAGFSRFMAWKSSDGTVEASPLIGQLETLINGMLNKTT LLDLVRHFIVFEKSKKEDRTTGIITIQTVKKLATYHQYYAVNRAVESTLRASGYAAAKDWQIFGLHHESPESYGLPGVTE QPIGDRKGGVVWHTQGSGKSLSMVFYTGKIVLAMDNPTVVVITDRNDLDDQLFDTFAASKQLLRQEPVQAENRGHLKELL NVASGGVVFTTIQKFQPEEGNVYPKLSDRRNIIVIADEAHRTQYGFKAKTIDIKDEQGNVIGQKIVYGFAKYTRDALPNA TYLGFTGTPIEKTDVNTPAVFGNYVDIYDISQAVEDGATVKIYYESRLAKIILSKEGKKLVSELDEELEKENLAETQKAK AKWTQLEALIGSEGRIRQIAQDIVTHFEQRKEVFEGKGMIVAMSRRIAADLYDEIIKIKPQWHNDDFKKGEIKIVMTSAS SDGPKISKHHTTKEQRRALAERMKDPEDELKLVIVRDMWLTGFDVPCLHTMYIDKPMKGHTLMQAIARVNRVYKDKPGSL VVDYLGIASDLKEALSFYSDSGGKGDPAVLQESAVQLMLEKLEIVSQMFHGFSYEHYFAADTSTKLSIILAAEEHILGLE NGKKRYIDEVTALSRAFSIAIPHEEAMDVKDEISFYQAIKARLVKFDSTGTGKTDEEIETAIRQVIDQALVTEQVIDVFD AAGIKKPDISILSEDFLLEVQNMEHKNIALEVLKKLLNDEIKARVKKNLVQSKSLMEMLEDSIKKYHNKVITAAEVIEEL IELSKEIKRMDKEPLEMGLSEFEYAFYTAIADNDSARELMQKEKLRELAVVLFDKIKQNASIDWTIKESVRAKLKVIVKR TLRQYGYPPDLQALATETVLKQAELITDEITKGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 46 |
