Gene Information

Name : Sden_0747 (Sden_0747)
Accession : YP_561760.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 868759 - 869670 bp
Length : 912 bp
Strand : +
Note : -

DNA sequence :
TTGCTTGTGAATAAGAGTTCAGTAACAGCCGACCCCATCATTGATGTTTTCTTAGATGCACTTTGGTCCTCAAAAGGCTT
AAGCAATAATACGCTTGCCTCCTACGGCACAGATTTACGCCATTTTCAGCGCTACCTTGCAGCTCAACAACTCAACTTAT
TAGATGCCAGCCAAGAAACTGTTCGCCAATACCTTGCTTGGCGGCAAGAGCAAGGTTTTGCTAAAAGCAGTAGCGCCAGA
CTGATGAGTAGCTTAAGGCGTTTCTACGCTTATTGGTTATCGCTTAAACGCATTGCTATTGATCCTTGTGCCAAATTGGC
TTCACCTAAGCTGAGCCGGGGGCTGCCTGCGGCGCTAAGTGAGGCCGAGGTCGATGCACTCTTGTCAGAGCCAGCAGCTG
ATGACCCCATAGAAATACGGGATAAAGCCATGCTTGAACTCTTATATGCCACAGGCCTTAGGGTGACAGAATTAGTGAGT
TTGACCATGGATCAGATAAGCCTGCGCCAAGGTCTAGTGCGTATTACAGGTAAAGGTGGAAAAGAGCGACTAGTGCCACT
TGGGGAATTGGCGGTGGCAGAAGTTGACACTTACTTGAGTTTAGCCCGCAGTGAGTTACTCAAAGGCAAGCAAAGTGAGG
TGTTGTTTCCCTCCAAACGCGGCACCATGATGACGCGGCAAACCTTCTGGCATCGTATTAAGCATTATGCCCTGCGGGCG
AGTATTGCCACTGAGCTTTCACCCCACACCCTGCGTCATGCATTTGCGACTCATCTTCTTAACCATGGCGCAGATTTAAG
GGTGGTACAGCTACTTTTAGGCCACAGTGACTTGTCGACCACGCAAATTTACACCCATGTGGCTAAGGCGCGCTTACAAG
ACTTACACAGACAACATCACCCTAGAGGTTAG

Protein sequence :
MLVNKSSVTADPIIDVFLDALWSSKGLSNNTLASYGTDLRHFQRYLAAQQLNLLDASQETVRQYLAWRQEQGFAKSSSAR
LMSSLRRFYAYWLSLKRIAIDPCAKLASPKLSRGLPAALSEAEVDALLSEPAADDPIEIRDKAMLELLYATGLRVTELVS
LTMDQISLRQGLVRITGKGGKERLVPLGELAVAEVDTYLSLARSELLKGKQSEVLFPSKRGTMMTRQTFWHRIKHYALRA
SIATELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAKARLQDLHRQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-58 58
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-58 58