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Name : Sden_0615 (Sden_0615) Accession : YP_561628.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : O-succinylhomoserine (thiol)-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 2.5.1.48 Position : 700878 - 702050 bp Length : 1173 bp Strand : + Note : - DNA sequence : ATGAGTCAGCATAAATTAGCCACCTTGGCCGTTCGTCACGGCATAGAGTCGGATACTCAGCATGGATCTGTGGTGCCACC GATTTATTTGTCGACCAATTACAGCTTTGAAGGGCATCAACAGCCCAGAGAGTTTGACTATAGCCGCTCGGGCAACCCAA CGCGTAACTTATTGGCAGAGGCGCTGGCAAAGTTAGAGCAAGGTCATAGTGCAGTTGTCACTTGTACTGGTATGGCGGCC ATCACCTTAGTCACCAGTTTGTTAGCCCCTGAAGATGTGTTAGTCATCCCCCATGATTGCTATGGCGGCAGCTACCGATT GTTTACTCACTTGGCAGCTAAGGGCAGTTTTAAGCTCGTGGTTATCGATCAAAATGACGCTAATGCATTGGCAGACGCTC TGCAGCTTAAGCCTAAATATGTTTGGCTAGAAACTCCGTCGAATCCACTGCTTAGGGTGGTGGATATCAGCGCAATTTGC CAACTGAGTCATCAAGTGGGCGCTAAAGTGGTGGTGGATAACACCTTTCTTTCCCCTGCATTGCAACAGCCATTAACCCT AGGGGCTGACATAGTGGTGCACTCCACCACTAAATACATTAATGGTCATAGCGATGTTGTTGGCGGCGCCGTGGTGGCTA AAGATGCCGACATTGGCGAGCGACTCGATTGGTGGGCAAATACCTTAGGTTTAACCGGTAGCGCGTTTGATAGTTACCTG ACCTTACGTGGACTTAGAACATTAAGTGTACGAATGCGCCAACATCAGGAAAATACCCAACTAATTATTGAGTCCTTAAT TAACAGTCCAGTGGTGAATAAGGTATATTACCCAGGTTTAACAGCCCACCCAGGTCACGAAATTGCATTAAAACAGCAAC AAGGTTTTGGTGGCATGGTAAGTTTTGAGCTTAATGGTGGAGAAGCAGCACTCGTGGCCTTCTTAAGTGAGCTTAAATTA TTTAGTCTTGCCGAGAGCTTAGGGGGGGTGGAGAGTCTGGTTGCCGTGCCAGCCACCATGACCCACAGAGCCATGACGGC CAAGGCCCGTGATGAGGCTGGCATTAGTGACACATTATTGAGATTATCTGTCGGCATCGAAGATGGCGTTGATCTTGTCG CCGATATTGAAGCAGCCTTAGCCGCTGTTGCAACACTGAAAGTCGTTGTTTAA Protein sequence : MSQHKLATLAVRHGIESDTQHGSVVPPIYLSTNYSFEGHQQPREFDYSRSGNPTRNLLAEALAKLEQGHSAVVTCTGMAA ITLVTSLLAPEDVLVIPHDCYGGSYRLFTHLAAKGSFKLVVIDQNDANALADALQLKPKYVWLETPSNPLLRVVDISAIC QLSHQVGAKVVVDNTFLSPALQQPLTLGADIVVHSTTKYINGHSDVVGGAVVAKDADIGERLDWWANTLGLTGSAFDSYL TLRGLRTLSVRMRQHQENTQLIIESLINSPVVNKVYYPGLTAHPGHEIALKQQQGFGGMVSFELNGGEAALVAFLSELKL FSLAESLGGVESLVAVPATMTHRAMTAKARDEAGISDTLLRLSVGIEDGVDLVADIEAALAAVATLKVVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 3e-45 | 41 |
