Gene Information

Name : Sden_0594 (Sden_0594)
Accession : YP_561607.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 677653 - 678504 bp
Length : 852 bp
Strand : +
Note : -

DNA sequence :
ATGATGCGCGAAGTAAAGAAAGCAAACCCCGAGTTTAAAGTGAATGAGTTATGTCGCGCCTTCGAAATAAGTTGCAGTAG
TTTCTATTACAAACCAATACCGTTAAGTATTAAGAAACAGTCAGTTATGCAGTTGGTTGAGGAAGTTTTCACTGATTCTT
ACTCTACTTATGGCAAACGAAGAATACAGGCTGAACTACTTGATTTAGATTGTAGAGTAGGTGTTTACGCTATTTCTACG
GTCATGAAAAACTTGGGGCTAAGGGCGATTAGGCCAAAGAAAAAGCATTACTATCCTAACCAAGGTGAGGAGCAAGTTTA
CGCCCCTAATTTGCTTAGACGACAGTTTAATCCTACGACTTATAATACTCACTGGGTTGGTGATATTACCTATATAAAAT
CACATCAAGGCTGGAGTTATTTAGCCTGTGTGCTTGATTTAGGAACCAAAGAGATCGTTGGATATGCTTTATCAAGTCAA
CCCAATGCAGCATTAGCGACAGCGGCCTTAAATAACGCGATACAACGTAAGAGGCCCAATACACAGGCATTGATGTTTCA
CTCCGACCAGGGCTGTCAGTACTCAGCCAAAGTGTTTAGAGAGCGGCTAAAACACTTAGGTATCGAGCAAAGCATGAGTC
GTAGAGGCAATTGCTGGGATAATGCGGTGATGGAACGATTTTTTAGGAGTTTAAAGACTGAAAGATTAAACCATTTAGCA
TTTATAAATCACAGCGCAGTAGTGAGCGTGGTTGAGCAATATATTCAGTTCTACAATTACAAACGCAGACATTCGGCAAT
AGATTATAAGACGCCACATCAAAAATATAATGAGTTAAAAAAAGCGGCTTAA

Protein sequence :
MMREVKKANPEFKVNELCRAFEISCSSFYYKPIPLSIKKQSVMQLVEEVFTDSYSTYGKRRIQAELLDLDCRVGVYAIST
VMKNLGLRAIRPKKKHYYPNQGEEQVYAPNLLRRQFNPTTYNTHWVGDITYIKSHQGWSYLACVLDLGTKEIVGYALSSQ
PNAALATAALNNAIQRKRPNTQALMFHSDQGCQYSAKVFRERLKHLGIEQSMSRRGNCWDNAVMERFFRSLKTERLNHLA
FINHSAVVSVVEQYIQFYNYKRRHSAIDYKTPHQKYNELKKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 4e-38 46
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-38 46