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Name : Sden_0056 (Sden_0056) Accession : YP_561076.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Virulence Product : ATPase FliI/YscN Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.15 Position : 66110 - 67420 bp Length : 1311 bp Strand : + Note : - DNA sequence : GTGATTAGTCTTACCCAATTAAAGCAAGTGACGACCAAGTACCATTATGGTTCTGTATTACGCAGTGAAGGGCTTATGCT GGTGGCCTCTTTACCGCAAGCATTTGTTGGTGAGCTTTGTACCATTAGGCGTGCTGATGAAACCCTGCCTGATATCTCAG CTGAAGTCATCTCAATCTCTGAGACACAAGTTAAGTTAATGCCTTTTCAATCTGCTAGTGGGATTAGTTTTGGGGATAAA TTAATTGGCAGTGGGACTTCTATAAGGCTGCCAATGGGTTCTGGCATGTTAGGGCATGTTGTTGATGCGTTTGGTCAGCC TCTAGATGAACAAGAGCTTGGGGTTGTACAGACTCAGTGTGTTTTTCTAGCCTCACACATTAATCCATTAACGAGAGCGG CAATTGACGAGCCGTTAACCACAAGAATTAAAGCGCTTGATAGCTTTATTCCTATCGGTAAAGGTCAAAGGGTGGGGATA CTTGCAGGGAGTGGTGTCGGTAAAAGTACTTTACTTGCCATGATGAGTGATAGCTGTGCCCAACAAAATGCTGTTATTGT CATTGTACTTGTGGGGGAACGAGGCCGAGAAGTTGAAGAGTTCGTTAATGGTAAAATGTTTAAAAGATTGCGAAGTCGTG CAGTGCTCGTTGCTGCTACAGCGGAAGAAATGCCTGTCACTAGGGTCCTTGCGGTTAAGTATGGGTTAGCACTGGCTGAG TCCTTATCTGCTGAGGGTAAGGAAGTTATTTTTGTTGTTGATTCACTCACTAGAGTGGCGATGGCCCAAAGAGAGATAGG TTTGGCCATTGGAGAACCGCCAACAGCTAAAGGTTACACACCTTCAGTTTTCTCTTTATTACAGCGCATCGTAGAGCGTT GCGGTGCATTTCGTCATCGAGCATCGATAACCGCGTTATTTAGTGTGTTAGTTGAAACTGATGATTTTGACGATCCTATC GTAGATACATTAAGGGCTGTCTTAGATGGTCACATAGTGTTAGATAGAGCTCTTGCAGAACAAGGGCACTTTCCCGCGAT AGATGTGTTAAGAAGTGTTAGCAGGCTGACAACGAATTTATTCGATGCTAAAAAAATAAAATTGTCTCGTGCCGGTCGAA TCTTATTATCAGAATATAAACAGAAAAAAATGATGATAGATCTTGCTGACGCAGAAGGGACATTGACAGGCCAATTTCAG CAATTAAAGAAAAAGCATGACTTGTTGAATCTATGGTTGCAACAAGACGAGCTAAGTTCGAAAACAACTCAGGAATTAGA GCTACAACTGATGGATATCATAGAAGGTTAA Protein sequence : MISLTQLKQVTTKYHYGSVLRSEGLMLVASLPQAFVGELCTIRRADETLPDISAEVISISETQVKLMPFQSASGISFGDK LIGSGTSIRLPMGSGMLGHVVDAFGQPLDEQELGVVQTQCVFLASHINPLTRAAIDEPLTTRIKALDSFIPIGKGQRVGI LAGSGVGKSTLLAMMSDSCAQQNAVIVIVLVGERGREVEEFVNGKMFKRLRSRAVLVAATAEEMPVTRVLAVKYGLALAE SLSAEGKEVIFVVDSLTRVAMAQREIGLAIGEPPTAKGYTPSVFSLLQRIVERCGAFRHRASITALFSVLVETDDFDDPI VDTLRAVLDGHIVLDRALAEQGHFPAIDVLRSVSRLTTNLFDAKKIKLSRAGRILLSEYKQKKMMIDLADAEGTLTGQFQ QLKKKHDLLNLWLQQDELSSKTTQELELQLMDIIEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 2e-55 | 42 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-47 | 41 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-54 | 41 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-55 | 41 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 7e-55 | 41 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 2e-54 | 41 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-54 | 41 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 2e-52 | 41 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 1e-52 | 41 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 2e-52 | 41 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 4e-47 | 41 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 9e-46 | 41 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 9e-46 | 41 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 2e-48 | 41 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 2e-48 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sden_0056 | YP_561076.1 | ATPase FliI/YscN | VFG1254 | Protein | 3e-57 | 43 |
| Sden_0056 | YP_561076.1 | ATPase FliI/YscN | VFG2499 | Protein | 2e-55 | 43 |
| Sden_0056 | YP_561076.1 | ATPase FliI/YscN | VFG0515 | Protein | 4e-55 | 41 |
