|
Name : alr (Sden_0522) Accession : YP_561537.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : alanine racemase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0787 EC number : 5.1.1.1 Position : 591695 - 592786 bp Length : 1092 bp Strand : + Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer DNA sequence : TTGAAACCTTTTCCCCGCGCAGAAATCAGCCGCAAGGCATTGCAAGCTAACTTGGCTCGCATTCGAGAATTAGCCCCGCA GAGTAAAATCATGGCTGTGGTGAAGGCGAATGGCTATGGCCATGGTTTATTGAATGTGGCTAACAGTGTGGCCACTTATG ATCAAGGCGCCGATGGTTTCGGCTTGGCGCGATTGGAAGAAGCCTTAGAGCTTAGAAGTGGCGGCGTTAATGCAAGGCTA TTGTTACTCGAAGGCTTTTTTAGGGTCACAGACTTACCCTTATTGGTGCAACATCATATCGATACTGTGGTGCACCACGA ATCACAAGTGGAGATGTTAGAGCAGGCTGAACTCACTACGCCGGTTACCGTATGGATGAAAATCGATACTGGCATGCACA GGTTAGGCTTTAGTTTGGCTCAGTTTGACGCCATTTATCAGCGCTTGCTGGCATGTCACAACATCGCTAAGCCGATACAC TTGATGACGCACTTTGCTTGTTCGGATGAGCCTGATAACAGTTTTACTCAAGCGCAAATCGATGCATTTGAAAGCGTGAC AGCCTCCCTTGACGGGGACAGAAGTCTTGCCAACTCTGGAGGAATGCTTTTTTGGCCTCAGAGTCAACGAGACTGGATCC GTGCTGGTATCGCACTCTATGGGGTGTCGCCTATGGTGGGGGATAAAGGCGGTAATCATGGTTTAGTGCCAGCAATGGAG CTTAAGTCTCAGTTGATTTCGGTCAAAGATCATCAGGCGGGTGACAGTGTCGGTTATGGGGCTTTTTGGCGAGCCCGCAA AGATACCCGCATCGGCGTGGTCGCCATAGGTTATGGCGATGGCTACCCAAGACATGCCCCAGAGGGCACGCCTGTGTGGC TCAATGGCCGCAGGGTGCCTATCGTTGGCCGCGTGTCTATGGATATGTTAACCGTTGATTTAGGTTTAGATTCCCAAGAT AAAGTGGGTGATGAAGTTCTACTCTGGGGTAGCGCACTGGCGGTGGAAGAAGTGGCAGACCATATTGGCACCATAGCCTA TGAGTTAGTCACCAAGTTAACCCCTAGGGTTGCAGTAGCCTTACTGCCTTAG Protein sequence : MKPFPRAEISRKALQANLARIRELAPQSKIMAVVKANGYGHGLLNVANSVATYDQGADGFGLARLEEALELRSGGVNARL LLLEGFFRVTDLPLLVQHHIDTVVHHESQVEMLEQAELTTPVTVWMKIDTGMHRLGFSLAQFDAIYQRLLACHNIAKPIH LMTHFACSDEPDNSFTQAQIDAFESVTASLDGDRSLANSGGMLFWPQSQRDWIRAGIALYGVSPMVGDKGGNHGLVPAME LKSQLISVKDHQAGDSVGYGAFWRARKDTRIGVVAIGYGDGYPRHAPEGTPVWLNGRRVPIVGRVSMDMLTVDLGLDSQD KVGDEVLLWGSALAVEEVADHIGTIAYELVTKLTPRVAVALLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dadX | AAC61705.1 | alanine racemase | Not tested | PAI I CFT073 | Protein | 7e-56 | 42 |
