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Name : murD (Sden_0353) Accession : YP_561371.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : - Position : 394074 - 395396 bp Length : 1323 bp Strand : + Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : ATGCAAACTCAATTCACGCACATAGTACTAGGACTGGGGGCCACAGGGCTTTCTGTAGTGCGTTATTTAGTGTCTCAAGG CATCAAGCCCTTGGTGATGGATAGCAGACGCAATCCTCCTGGGGCCGATGTATTAGCACAAGAGTTTGCCGATATTGAGC TGATTACTGGTGGTTTCGATTGCCGTTATTTAGTCCAGGCACAACAGCTAGTGATAAGCCCAGGTATTGCCATAGATACC CCAGAAGTGCGCGCGGCGATGGACATGGGCATAGAAGTCATAGGTGATGTTGAGCTGTTTGCTCGCGCCATTGCCGATAA AAAGCCCTGCGTGATTGGCATTACCGGCTCGAACGGGAAAACCACTGTCACCACTTTAGTCTATGAAATGCTGTTGGCGG CGGGGTTGAAGGTTGCAGTTGGCGGCAATATAGGCACGCCAGCATTAGATTTGCTCGCCATGGACGTGGATTATTATGTG CTCGAATTATCGAGTTTTCAGCTAGAAACCACCTATAGCCTTAATTGTATCGCCGCGACCTGTTTAAATATTTCAGAAGA TCACATGGACAGATACAGTGATTTAACCGCTTATCGCAATGCTAAATTGCGCCTATACGATCAGAGCCGTTTCATCATGT ATAACCTAGATGATGAGCTGACTTACCCCCATGAACCCATGAATCAAAACCATTTTGGTTTAGGGGTACCAGATGGTGAT GCTTGGGGCTTAGGTGACGGTAAGATATATCACGGCGATAGCGACATCATTAACCTCATAGATGTGGCCTTAATTGGCAG TCATAACCATGGCAATCTACTGGCGGCAATGGCGTTAGTGCATGCCTGCGGCGTCGAAAAAGAGCCCATGGTCACAGTGG CTAAGACATTTAGCGGCTTGTCCCATCGCTGTGAGTTGGTGGCGGTTAAACAGGGCGTGTCTTACATCAATGATTCTAAA GCGACTAATGTTGGCGCTACTGTGGCGGCATTAGAAGGCTTAAGCACTCATCTTGGTGAAGTGTACTTAATTGCCGGAGG TGACGGTAAAGGCGCTGACTTTAGGCCTTTGACTCAAGCGCTTAGCAATGTTGTGCAGCTTATTACTTTGGGCAGGGATG GCCATAAACTAGCAAAATTAAAGCCAGGCGCCATTGAAGTTGCCACCATGGCAGAAGCGGTAGCCAAAGCCGCTGAAATG GCATATTCAGGCGACATCGTCTTGCTATCACCCGCCTGCGCCAGTTTAGACATGTATAAGAATTTTATGGCAAGGGGTGA TGACTTTAGGCAATTGGTGGAGCAGCTCCCCGATGGTGTCTAA Protein sequence : MQTQFTHIVLGLGATGLSVVRYLVSQGIKPLVMDSRRNPPGADVLAQEFADIELITGGFDCRYLVQAQQLVISPGIAIDT PEVRAAMDMGIEVIGDVELFARAIADKKPCVIGITGSNGKTTVTTLVYEMLLAAGLKVAVGGNIGTPALDLLAMDVDYYV LELSSFQLETTYSLNCIAATCLNISEDHMDRYSDLTAYRNAKLRLYDQSRFIMYNLDDELTYPHEPMNQNHFGLGVPDGD AWGLGDGKIYHGDSDIINLIDVALIGSHNHGNLLAAMALVHACGVEKEPMVTVAKTFSGLSHRCELVAVKQGVSYINDSK ATNVGATVAALEGLSTHLGEVYLIAGGDGKGADFRPLTQALSNVVQLITLGRDGHKLAKLKPGAIEVATMAEAVAKAAEM AYSGDIVLLSPACASLDMYKNFMARGDDFRQLVEQLPDGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 2e-61 | 42 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 2e-61 | 42 |
