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Name : rph (Sden_0319) Accession : YP_561337.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 357751 - 358464 bp Length : 714 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGCCCAAGTAAACGTACGCCAGCACAAACTCGCCCTATCACTATTACCCGTAATTTTACTGCCCATGCTGAAGGTTC AGTGTTGGTGGAATTTGGTGAGACTAAGGTTCTTTGTACTGCGAGCTTCACCGAAGGCGTACCGCGTTTTCTTAAGGGCC AAGGCCAAGGTTGGGTAACGGCGGAATATGGCATGTTGCCACGCTCGACTCACAGCCGTATGGACAGAGAAGCCGCTCGT GGTAAGCAGTCTGGTCGTACTCAGGAAATTCAACGTTTAATCGGCCGTTCATTGCGCGCGGCCGTTGACATGAAGGCCCT AGGTGAAAACACTATCGTTATCGATTGTGATGTTATTCAAGCCGATGGTGGCACTCGTACTGCGGCCATTACTGGTGCTT GTGTGGCTATGGTTGATGCACTTAACTGGGCTCGCGCTAAGAACATTATCAAGTCTAACCCACTTAAGTTCCTTATTGCT GCTGTCAGTGTTGGCATCTATAAAGGTGAAGCCATTAGTGACTTAGAATATCTAGAAGACAGCGCGGCTGAAACGGATAT GAACGTGGTGATGACTGAAACCGGCAAAATCATCGAAGTGCAGGGCACTGCCGAAGGTGAGCCATTCAGCCACGAAGAGT TAAACGAGTTATTGGGTCTGGCGAAAAACAGCATTCGCGAGATCGTCGATGTGCAGAAAAGCGCATTGAATTAA Protein sequence : MRPSKRTPAQTRPITITRNFTAHAEGSVLVEFGETKVLCTASFTEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMDREAAR GKQSGRTQEIQRLIGRSLRAAVDMKALGENTIVIDCDVIQADGGTRTAAITGACVAMVDALNWARAKNIIKSNPLKFLIA AVSVGIYKGEAISDLEYLEDSAAETDMNVVMTETGKIIEVQGTAEGEPFSHEELNELLGLAKNSIREIVDVQKSALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 6e-64 | 58 |
