Gene Information

Name : Sden_3034 (Sden_3034)
Accession : YP_564035.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3644010 - 3645509 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGCAGTAAAAACACGCAATGATTGGGAAAGCATGGCACAGGCGCTGTCTATCCAAGGTCAGGCATTCATTAATGG
CAAGTATCAAGCCGCCGCTTCCAAACAGACATTCGATTGTTTAAGCCCCATAGATGGCCGCTTGCTCGCCAAAGTCGCCA
GTTGCGATCTCGCCGATGCTAATTTAGCCGTGGATAATGCCAGAGACGTATTTGAAGCCGGCACTTGGTCACAACTGCCG
CCGGTTAAGCGCAAGCAAGTATTAATACGTTTTGCCGAGCTGATGGAAGAAAATGCCGATGAATTAGCGCTGCTTGAAAC
CTTGGACATGGGGAAACCCATACGTTATTCAAAATCTGTGGATGTGATGGCCGCCGCCAGAGCCATACGTTGGTGCGGTG
AAGCCGTTGATAAAATTTACGATGAGATTGCGCCGACAGCACACAATGAAATTGGCATGATAACCCGTGAACCTGTGGGG
GTGGTGGCGGCCATAGTGCCGTGGAATTTCCCTATGATCATGGCCAGTTGGAAATTAGGTCCAGCACTCGCCACAGGCAA
TAGCGTGATTTTAAAGCCTTCTGAAAAATCACCATTGACCGCCATTCGTCTGGCTCAGCTGGCATTGGATGCGGGCATGC
CCGCTGGCGTGCTCAATGTGTTGCCAGGTTTTGGTCACACTGTGGGTAAAGCCTTGGCGCTGCACATGGATGTGGACACC
TTAGTGTTCACAGGTTCAACCAAGATTGCCAAGCAGTTAATGATCTACGCGGGTGAATCAAATATGAAGCGGGTCTGGCT
GGAGGCAGGCGGTAAGAGCCCGAACATAGTCTTTAATGATGCGCCGAATTTACAAGCCGCCGCAGAAGCTGCTGCCAGCG
CCATCGCCTTTAACCAAGGGGAAGTCTGCACCGCAGGCTCCAGATTATTGGTGGAATCAGGCATTAAAGATGAGCTGATT
GCCTTAATTGCTAAAGAGTTTGAAGGCTGGCAACCGGGTAACCCATTGGATCCTGCCACCACCTGCGGCGCCATGGTGGA
CAAGCAGCAGCTAGACAATGTATTAGGTTATATTCAAGCGGGTAAAAAAGAAGGGGCGGCCGTGGTGTCTGGTGGCTCAC
AAGTGCTGGCAGATACCGGCGGGGTTTATGTGCAGCCGACTATTTTTAGCGGCGTCACCAATCAGATGACCATAGCCAAG
GAAGAGATTTTCGGCCCAGTGCTCGCGGTAATCGAATTCGAAGGCATGGAGCAAGCCATAGAAATTGCCAACGACACCAT
TTACGGCTTAGCGGCAGGGGTGTGGACCAGTAACTTGAGTAAGGCCCATAAAACCGCCAAAGCACTGCGCTCTGGCATGG
TGTGGATCAATCATTACGACGGCGGTGACATGACGGCGCCATTCGGTGGTTATAAACAGTCAGGCAATGGCCGAGATAAA
TCTTTGCATGCGTTTGATAAATATACTGAAATTAAAGCAACCTGGATAGCGCTCGATTAA

Protein sequence :
MSAVKTRNDWESMAQALSIQGQAFINGKYQAAASKQTFDCLSPIDGRLLAKVASCDLADANLAVDNARDVFEAGTWSQLP
PVKRKQVLIRFAELMEENADELALLETLDMGKPIRYSKSVDVMAAARAIRWCGEAVDKIYDEIAPTAHNEIGMITREPVG
VVAAIVPWNFPMIMASWKLGPALATGNSVILKPSEKSPLTAIRLAQLALDAGMPAGVLNVLPGFGHTVGKALALHMDVDT
LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPNLQAAAEAAASAIAFNQGEVCTAGSRLLVESGIKDELI
ALIAKEFEGWQPGNPLDPATTCGAMVDKQQLDNVLGYIQAGKKEGAAVVSGGSQVLADTGGVYVQPTIFSGVTNQMTIAK
EEIFGPVLAVIEFEGMEQAIEIANDTIYGLAAGVWTSNLSKAHKTAKALRSGMVWINHYDGGDMTAPFGGYKQSGNGRDK
SLHAFDKYTEIKATWIALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-126 56
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sden_3034 YP_564035.1 aldehyde dehydrogenase VFG0082 Protein 3e-71 41