|
Name : Sden_3021 (Sden_3021) Accession : YP_564022.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3629722 - 3630531 bp Length : 810 bp Strand : + Note : - DNA sequence : ATGAGTGTCAGTAAGTCAGGCTATTACGATTGGCATAAACGCCCTACAAATGTGATAAGCCTTGAAACATTGAAGCTTTA TCGCCTTGTTCGACAGCTATTTAAGCAAAGTCGAGGCAGCTTAGGGAATCGTGAAATGGTGAAGAAATTGCGCAAGGAAG GCTACCAGGTTGGTCGCTATCTCGTTCGTAAAATTATGCACCGCCTTCGACTCAAAGCTACCCAGCGACGAGCTTACAAG GTGACGACACAGCGAAAACACTCTGATGCAGTGGCTGATAATCTGTTAAACATGAACTTTAACCCAGTATCCGCAAATCA GGTTTGGGCAGGTGACGTGACCTATTTAAAGACAGGTGAAGGCTGGATGTACTTGGCAGTGGTAATGGATTTATATTCAC GCCGGATTGTTGGATGGCACATAGACAAGCGTATGACCACGGATTTGATATCTAAGGCATTAATGAAAGCCTACAACCTG CGTCAACCGGCCAGAGGGCTGGTATTTCACAGTGACCGAGGCTCACAGTATACCAGCAAGCAATTCGGTAAGCTGCTATC GAGCTATGGTATCCGAGCCAGTATGGGGGATGTGGGTGCGTGTTGGGATAATGCCGTCGTTGAACGTTTCTTTGGTAGTT TGAAACACGATTGGATTTTTAAAGTTGCTCAACCAACAAGGGAGTTTATGAAGCAAGATGTGACTGCTTACATGAAATAT TACAACTTGGAGCGACTTCATTCTGCTAATGGTGATCTGTCACCTGTAGAATTTGAAAATTCTCAACTAAAAGTGTCCAA TTTGGGTTGA Protein sequence : MSVSKSGYYDWHKRPTNVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKATQRRAYK VTTQRKHSDAVADNLLNMNFNPVSANQVWAGDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALMKAYNL RQPARGLVFHSDRGSQYTSKQFGKLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVAQPTREFMKQDVTAYMKY YNLERLHSANGDLSPVEFENSQLKVSNLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 2e-38 | 42 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 1e-38 | 42 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 5e-38 | 41 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 7e-38 | 41 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 1e-37 | 41 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 1e-37 | 41 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 9e-36 | 41 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 9e-36 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sden_3021 | YP_564022.1 | integrase catalytic subunit | VFG1484 | Protein | 5e-36 | 41 |
