Gene Information

Name : Sden_2839 (Sden_2839)
Accession : YP_563841.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3389098 - 3390060 bp
Length : 963 bp
Strand : -
Note : -

DNA sequence : 
TTGGAACTTTCCTCACATTTTACCCCAGAAAAAATTCAAGTTGGCATCAGCAGCTGTTTGTTAGGTCAAAAGGTGCGTTT
CGATGGCGGTCATAAGAACTCTTATTATTGTGATGTCACCTTAAGAGAACATGTTGAATTCGTGCCTGTGTGCCCAGAAA
TGTCCATCGGCTTAGGTGCGCCGCGAAAGAGTATTCGACAAGTGCGAGACGGTGATACTCTACTCATCCAAAGCGGCGAT
GGCAGCTTAGATGTCACAGATAAACTCAACACTTTTAGCCAGCAGAAAGTGGCTGAACTGGATTTTTTAGGTGGCTATAT
TCTCTGTGCCAAATCGCCCACTTGCGGCATGGAGCGAGTCACTGAATATAAAATCGGTACTAATAACGGCAGTAAAGCAG
GTGTCGGGGTATTTGCCAAGGTGTTGATGGAGACGTACCCTCATTTGCCGGTGGAAGAGGAGGGCAGATTAAACGATCTG
GTGCTCCGTGAGAACTTTATCACTCGCCTTTACGCTTACCATGATTGGTTTTCCATGTTGGCGAGCGGCTTAACTAAGCA
CAAACTTATTCAGTTTCACTCCCGTTATAAATATTTAATCATGGCCCACAGTCCTAAATGGTATCGTGCTTTGGGGCCTA
TTTTGGCCGATATTCAAGACTTATCAGCCAGTGCAGATGCTTATTTTGATGGCTTTATGACGGCCCTTAAAATCAAAGCC
ACTCGCAAAAATCACACCAGCACCTTGCAGCACATTCAAGGCTATTTTAAGAAGCATTTGTCCGCAGGACAAAAGCAAGA
GCTGAGTGAGTCTATCGACAAGTATCGCCAAGGGTTATTGCCATTATTAGTGCCAATTACCTTGATTAATCATTACTTGC
GCGAATTCCCAACGCCTTATATTGAAAGCCAAGTGTATTTAAATCCTCACCCAGAGGAGTTGAAACTGCGCTATGCCTAT
TGA

Protein sequence : 
MELSSHFTPEKIQVGISSCLLGQKVRFDGGHKNSYYCDVTLREHVEFVPVCPEMSIGLGAPRKSIRQVRDGDTLLIQSGD
GSLDVTDKLNTFSQQKVAELDFLGGYILCAKSPTCGMERVTEYKIGTNNGSKAGVGVFAKVLMETYPHLPVEEEGRLNDL
VLRENFITRLYAYHDWFSMLASGLTKHKLIQFHSRYKYLIMAHSPKWYRALGPILADIQDLSASADAYFDGFMTALKIKA
TRKNHTSTLQHIQGYFKKHLSAGQKQELSESIDKYRQGLLPLLVPITLINHYLREFPTPYIESQVYLNPHPEELKLRYAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-66 46
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-66 46
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-66 46
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-66 46
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-66 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sden_2839 YP_563841.1 hypothetical protein VFG0490 Protein 1e-66 46