Gene Information

Name : lspA (Sden_2722)
Accession : YP_563724.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 3259202 - 3259750 bp
Length : 549 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
GTGAATTCGCCTAAGAAAGTAAGCCCAGTGAGCACGATACCGGTAAGCTGGAAAGACAGTGGTTTACGCTGGTATTGGGT
AGCAGGGTTTGCCTTTGTGGCCGATCAACTGTCTAAACTATGGGTGTTAGCTAACTTTGAATTGTCGGAAACTGTACAGC
TTCTGCCATTTTTCAACTTCACCTATGTGCGCAACTATGGTGCAGCATTTAGCTTTTTAAGCGATGCGGGTGGTTGGCAA
CGATGGTTTTTCACAGTTATAGCCTTAGGTTTTAGTACCTTGCTAACCTTGTGGCTGCGTAAGCAGTCACATACCTTGTG
GCGTACTAATTTAGCCTTTACACTGGTTATTGGTGGTGCATTGGGGAATTTAGTCGATAGGCTATATCATGGCTATGTAG
TGGATTTTCTCCATTTCTATTGGCAAAGCTATCATTTCCCTGCCTTTAACATAGCGGATTCAGCCATCTTTATTGGCGCT
GTGCTTATTATTTGGGACTCATTTAAGCCCCAAAAGGCGTCAGTTGTGAGTCAAGATAGCTTGAAGTAG

Protein sequence :
MNSPKKVSPVSTIPVSWKDSGLRWYWVAGFAFVADQLSKLWVLANFELSETVQLLPFFNFTYVRNYGAAFSFLSDAGGWQ
RWFFTVIALGFSTLLTLWLRKQSHTLWRTNLAFTLVIGGALGNLVDRLYHGYVVDFLHFYWQSYHFPAFNIADSAIFIGA
VLIIWDSFKPQKASVVSQDSLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-16 43
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-16 43
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-16 43
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 2e-19 42