Gene Information

Name : rdgC (Sden_2691)
Accession : YP_563693.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 3222511 - 3223422 bp
Length : 912 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAATCTTACCCTCTATCGTTTTAATAAGCCTTTTTCTGTGGATACCGAGGCACTGGAAACTGCATTAGC
TGATTTCACTTTTTCACCTTGTTCTAGCCAAGATATCAGTAAGTTTGGCTTCTCTAAAGCCCTAGGTAAAAAAGGCAGCG
CCTTAGTGCATAGCGCCGAAAATCGTCATCTCATTTGTGTGACTAAAGAAGAGAAGATTCTTCCTGGGCAAGTGATCAAA
GAAGCCTTAGATGAGAAAGTGGCTGAAATTGAAGAACTAGAAAACCGCAAGGTCACTAAGAAAGAAAAAGACACCATTAA
AGATGAAATCACTACCACCTTATTACCACGAGCATTTTCGCGTCGCAGTCAGACCCACGCGTTAATTTTGCCCGAAATAG
AGATGATTTTGGTAGACAGTTCAAGTGCCACTAAAGCCGAAGAGTTGTTAGCTTTATTGCGTAAAGCCTTAGGCAGTCTG
CCCGTCATTCCTTTAAGTTTCACCACACCAATAGAACAGACATTAACCCAATGGCTGCAAGCTGGTGAATCACCGCTGCC
CTTTGCCATGCAAGATGAGGCCGAGCTTAAGTCTGATTCAGATGAAGGTGGTATCGTCAGATTTAAGCAGCAAGTGCTGC
AAGAAGATGAAGTACTTGCCCATATAGCAACAGGAAAGTCAGTGCATAAACTGGCACTGCATTTTGCTCAGTCCATCGCC
TTTTTAATGCAATCTGATGCCAGCGTCAAACGCCTTAAGTTTTCTGAAGAGTTTAGGGCCAATAACGATGAAGTGAGTGG
TGAAGATCCATTAGCCAGACTCGATGCAGACTTTGCTTTAATGGGCAGCGAGTTAATCGCCTTTGTGCAAGCCTTAACGC
AAGCCTTAGGCCCTATGGAAGAAAGCATCTAA

Protein sequence :
MWFKNLTLYRFNKPFSVDTEALETALADFTFSPCSSQDISKFGFSKALGKKGSALVHSAENRHLICVTKEEKILPGQVIK
EALDEKVAEIEELENRKVTKKEKDTIKDEITTTLLPRAFSRRSQTHALILPEIEMILVDSSSATKAEELLALLRKALGSL
PVIPLSFTTPIEQTLTQWLQAGESPLPFAMQDEAELKSDSDEGGIVRFKQQVLQEDEVLAHIATGKSVHKLALHFAQSIA
FLMQSDASVKRLKFSEEFRANNDEVSGEDPLARLDADFALMGSELIAFVQALTQALGPMEESI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 1e-53 43