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Name : Sden_2666 (Sden_2666) Accession : YP_563668.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 3197407 - 3198129 bp Length : 723 bp Strand : - Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGGAATGCGCAGTTGTTATCCCAGCTAGATATCAATCTAGCCGTTTCCCAGGGAAACCATTAGTTAATATCCTTGGGAA ACCAATGATACAGCACGTTTGGGAGCGGTGTTCTGCTGCTGTTGGAGCAGAAAATGTTTATGTAGCAACAGATAATGATA AGATTTATGAAGTATGTAATGCTTTTGGTGCAAAAGTTATTATGACTTCATCCGAATGCTTAACGGGTACAGATAGATTA GCTGAGGCCAATCTGCAGTTGGATTGCGATTTTATCATTAATGTACAGGGCGATGAGCCTTTGATAGAACCTGATGATAT TCGAACTGTTATAGCAAAATATAAAGAACAACCAAATACGGTTGTTAATGCGATGTGTGCAATTTATTCAGAAGATGAAT TCAGATCCTTTACCGTACCAAAAGTTGTTGTAAGCAAAACTGGTAATTTACTCTATATGAGTCGCTCTCCTATACCAGTC ACAAAAAACAATGAGTATACTTTTGGTTATAAGCAAGTTTGTATCTATGCTTTTTCTAAAGAGCATCTAGTCTTTTTTGC TTCTCATAAAGAGAAAACAAAAATTGAGCAGGTTGAGGATATTGAAATATTACGTTTTATAGAGAATGATATTCCAGTAC AGATGATAGAAGTGCCAAGTTCTAGTATTGCCGTTGATACTCCAGGAGATGTACAACGTGTAATAATGAGAATGCAAAAT TAA Protein sequence : MECAVVIPARYQSSRFPGKPLVNILGKPMIQHVWERCSAAVGAENVYVATDNDKIYEVCNAFGAKVIMTSSECLTGTDRL AEANLQLDCDFIINVQGDEPLIEPDDIRTVIAKYKEQPNTVVNAMCAIYSEDEFRSFTVPKVVVSKTGNLLYMSRSPIPV TKNNEYTFGYKQVCIYAFSKEHLVFFASHKEKTKIEQVEDIEILRFIENDIPVQMIEVPSSSIAVDTPGDVQRVIMRMQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK15335.1 | unknown | Not tested | Not named | Protein | 2e-53 | 52 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-38 | 43 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-38 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-38 | 42 |
