Gene Information

Name : Sden_2648 (Sden_2648)
Accession : YP_563650.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Virulence
Product : UDP-phosphate galactosephosphotransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : 2.7.8.6
Position : 3179496 - 3180098 bp
Length : 603 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAAAGATTTTTTGATATAGTAGTCTCATTAATGACAATTTTTTTATTGTTGCCTATTTTTTTATTTTTAATGTT
GCTAGTGTCAATAAAAATTGGTAGCCCAGTTATTTTTGTACAAAAACGACCAGGTATACATGGTAAATTGTTGCATTTAT
ACAAGTTTCGTTCAATGAGCAATGCAGTCGATGAGCATGGATCTCTTTTACCTGATGCTGAGCGTTTAACTTCTTTTGGG
ATGAAACTACGCTCTACCAGTTTAGATGAGATACCAAGTTTGTTTAATGTATTGAAAGGTGACATGAGCTTAGTCGGACC
TCGCCCATTATTGGTAGAATATCTGCCTCTGTATTCTCAAGAACAAGCTCGCAGGCATAATGTTCGTCCTGGCATTACCG
GTTGGGCACAAATCAATGGACGCAATGCGATTAGCTGGGAAGATAAGTTTAAGTTTGATGTTTGGTATGTTGATAATCAA
AGTTTTTGGTTAGATATTAAAATATTGTTGTTAACGGTAAAAAAAGTCTTCGTGCGGGAAGGTATTAGTGCTGATGGTCA
TGTAACCATTGAACCATTTAGAGGGTCAGAACGTGGATCCTGA

Protein sequence : 
MIKRFFDIVVSLMTIFLLLPIFLFLMLLVSIKIGSPVIFVQKRPGIHGKLLHLYKFRSMSNAVDEHGSLLPDAERLTSFG
MKLRSTSLDEIPSLFNVLKGDMSLVGPRPLLVEYLPLYSQEQARRHNVRPGITGWAQINGRNAISWEDKFKFDVWYVDNQ
SFWLDIKILLLTVKKVFVREGISADGHVTIEPFRGSERGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-25 45
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 5e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sden_2648 YP_563650.1 UDP-phosphate galactosephosphotransferase VFG1309 Protein 2e-25 41
Sden_2648 YP_563650.1 UDP-phosphate galactosephosphotransferase VFG1369 Protein 5e-19 41