|
Name : Sden_2521 (Sden_2521) Accession : YP_563524.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Resistance Product : methionine gamma-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 4.4.1.11 Position : 3011546 - 3012718 bp Length : 1173 bp Strand : - Note : - DNA sequence : ATGCAAGATAAATGGAAGTCAGCAACGGTTGCGATTCATGGTGGTCATCAAAGAGAAGCGTTTGGGGCGCTGGTGACACC TTTATACCAAAGTGCCACCTTTGCGTTTGAAACCGCAGAGCAGGGCGGAGCGAGGTTTGCTGGGGACGAACCTGGCTATA TTTATACTCGTCTTGGCAACCCAACCACGGCTGAACTCGAACGAAAGATGGCGCTGCTAGAAGGCGCCGATGATGCGGCT GCAACGGCATCTGGCATGGCGGCCGTGTCTGCTGCGCTATTGACTCATCTGGAGCAAGGGGACCATTTAATTGCCTCTAA AGCCGTGTACGGTTGCACCTATGCGTTGATAACCACCCAGCTTTCCCGCTATGGTATCAGCACAAGTTTGGTGGATTTTA GTGATATGCAAGCGGTTGAAGCCGCTATAAAACCTAACACTCGGGTACTTTTTTGTGAAACGCCGGTGAATCCCCATCTA CAAGTGTTTGATTTAGACGCCATGGCGAAAGTGGCTAAAAAACATGGGCTGATTAGCATAGTGGATAACACCTTTATGAC GCCACTGCTGCAAAAGCCATTGGCTATGGGCATAGACATGGTGATCCACAGCGCGACCAAATATTTAAACGGCCATGGTG ATGTGATTGCCGGCATAGTGTGCGGCAACAGCGAGCATATGCATAAATTGAGGTACGAGATTTTAAAAGACTTTGGCGGC GTTATGTCTCCCCATGATGCTTGGCTTATTCTGCGAGGGCTTAAGACTTTAGATGTGCGCTTAGCAAGGCATTGTGATAA TGCCGAAATATTGGCTAACTACTTGGTTGAGCACAAGGCCTTTTCCCAGGTGTTCTACCCAGGGTTAAGTACCCATCAAG GTCATGCGTTTATTGGCAAGCAAATGAAGCGTGCTGGTGGCGTGATAGCGTTTGAGCTTAAGGGTGATAAGCAAGATGCA ATTAACTTTGTCAATCGTTTAAAGCTATTTACCATAGCGGTAAGTTTAGGTGATGCTGAGTCATTAATTCAACATCCTGC CTCCATGACTCACTCGCCTTATACCTTAGAGGCCAGAATGGAAGCTGGGATCACTGATAATTTATTGCGAATTTCAGTGG GCCTTGAAGATGTGCAAGATTTAATTGCTGATATCGAGCAAGCGTTAGCGTAA Protein sequence : MQDKWKSATVAIHGGHQREAFGALVTPLYQSATFAFETAEQGGARFAGDEPGYIYTRLGNPTTAELERKMALLEGADDAA ATASGMAAVSAALLTHLEQGDHLIASKAVYGCTYALITTQLSRYGISTSLVDFSDMQAVEAAIKPNTRVLFCETPVNPHL QVFDLDAMAKVAKKHGLISIVDNTFMTPLLQKPLAMGIDMVIHSATKYLNGHGDVIAGIVCGNSEHMHKLRYEILKDFGG VMSPHDAWLILRGLKTLDVRLARHCDNAEILANYLVEHKAFSQVFYPGLSTHQGHAFIGKQMKRAGGVIAFELKGDKQDA INFVNRLKLFTIAVSLGDAESLIQHPASMTHSPYTLEARMEAGITDNLLRISVGLEDVQDLIADIEQALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-59 | 41 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 7e-61 | 41 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 4e-62 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sden_2521 | YP_563524.1 | methionine gamma-lyase | BAC0207 | Protein | 1e-81 | 50 |
