Gene Information

Name : Sden_2367 (Sden_2367)
Accession : YP_563370.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Resistance
Product : ABC transporter related
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2818091 - 2818840 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGACTAATACTGCTACTGCGTCAAATACCAATGCCATTTCCGTCACTGACCTCAATAAAACTGTGGTGACCCAAGA
AGGGGAGCTCACTATCCTCAACGGCATTTCAATGGATGTCAAGCAAGGTGACAGTGTGGCCATATTAGGCCCCTCAGGTT
CGGGTAAATCTACCTTGCTGGGATTACTGGCAGCCCTAGACACGCCAACGAGTGGTGAAATCTTTCTCGATGGTGTGGCC
TTATCAAAACTTGACGAAGAGCAAAAGGCCGCGCTGCGTAAGCAAAAAGTGAGCTTTATTTTTCAATCCTTTATGTTAGT
CGACACCTTAACGGCTCTTGAGAATGTCATGCTCCCAGCCGAGCTTGCAGGCGTTGTTGATGCCAAACAAAAAGCCCAAA
ACATGCTAGAAAGGGTAGGGCTCTCCCATAGATTAAGTCACCTTCCTAAACAGTTGTCTGGCGGCGAACAGCAAAGAGTT
GCCATAGCAAGGGCCTTTATTTGTGAACCCAAGGTGTTATTTGCCGATGAGCCCACGGGCAATTTAGACAAGGCCAATGG
CGATAAAATTGCCGATATGTTGTTTGAGCTAAACCAAGAAAGCGACACCACCTTAGTGTTAGTGACCCATGATTTAGCCT
TGGCTAAACGCTGTCAGCGACAATTCTTGATGGACAACGGGGTGCTAACCGAAGCGGTGGCAGAAGGTCTGCCTAAAACC
TTGGCCCCTCATTGCGAAGAGGTGAGCTAA

Protein sequence : 
MSTNTATASNTNAISVTDLNKTVVTQEGELTILNGISMDVKQGDSVAILGPSGSGKSTLLGLLAALDTPTSGEIFLDGVA
LSKLDEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAGVVDAKQKAQNMLERVGLSHRLSHLPKQLSGGEQQRV
AIARAFICEPKVLFADEPTGNLDKANGDKIADMLFELNQESDTTLVLVTHDLALAKRCQRQFLMDNGVLTEAVAEGLPKT
LAPHCEEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-24 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sden_2367 YP_563370.1 ABC transporter related NC_012469.1.7686878. Protein 7e-34 46
Sden_2367 YP_563370.1 ABC transporter related NC_008702.1.4606598. Protein 5e-32 45