Gene Information

Name : Sden_2339 (Sden_2339)
Accession : YP_563342.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2770374 - 2771894 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence : 
ATGATCTATTCACAACCCGGCACAGACGGTGCCAAAATGAATTTCAAGCCACTCTACAATAATTTTATTGGCGGAAAGTG
GCAGCCTCCCGTTGGCGGCAAGTATTTTGATAATGGCTCGCCAGTTAATGGCGAATTTTTCTGCCAAGTGCCCCGCTCTG
ATGGCCGCGATATCGAGCTGGCACTGGATGCAGCCCACACAGCCTTTGCCACTTGGGGTAAAACCAGCGTTACCGAACGC
TCAAATCTACTGCTTAAAATTGCCGACAGGGTCGAGCAAAACATTGAATACTTAGCGGTGGCTGAAACCTGGGAAAATGG
CAAAGCCGTGCGCGAAACCTTAAATGCCGATTTACCGCTGTTTGTCGATCATTTCCGTTATTTTGCTGCCGCTATCCGCG
CCCAAGAAGGCAGCGCCGCTGAGCTTGATATGAATACCGTTGCGTATCATTTCCCTGAGCCACTAGGGGTCGTCGGGCAG
ATCATTCCGTGGAATTTCCCGCTATTGATGGCCGCTTGGAAGATAGCCCCTGCCCTTGCTGCCGGTAACTGCATCGTATT
AAAACCTGCCGAACAGACCCCAGCATCCATCTTAGTCTTGCTGGAACTTATCGAAGATATATTGCCAGCGGGGGTGTTAA
ATGTCGTTAATGGTTATGGCACAGAAGCAGGCCAAGCCCTAGCCACCAGCAAGCGCATCGCTAAATTGGCCTTTACGGGT
TCTACAGCTGTGGGTCAGCACGTACTCAAATGCGCGGCAGAGTCGTTAATTCCGTCTACAGTTGAACTGGGCGGTAAGTC
ACCCAATATCTATTTTGCCGATGTACTCGAACACGAAGACAGCTACCTAGATAAAGCCATCGAAGGCATGCTACTGGCCT
TTTTCAATCAAGGTGAGGTTTGTACTTGCCCTTCAAGGGTGCTAGTGCAAGAGAGCATCTATGATAAATTTATTGAAAAA
GTCATCCAAAGGGCGAAAACCATCAAGCAAGGGGATCCACTGGATACTGACACCCAAGTTGGGGCACAAGCTTCAAAAGA
ACAGTTTGATAAAATCTTAAGCTACTTAGCAATAGGCAAAAATGAAGGCGCCCAAGTGCTGATTGGCGGGGATCCTTTGC
AACAAAGCGGCAGCCAGGCCCAAGGGTTCTACATTAACCCGACTATTTTAAAAGGTCATAACAAGATGCGGGTATTCCAA
GAAGAAATTTTTGGCCCTGTTATTGCCGTCACCACCTTTAAAGATGAGGCTGAGGCACTCGCCATTGCTAATGACACAGA
GTATGGCCTAGGAGCTGGCCTGTGGACTCGAGACATGAACCGCGCCCAGCGTATGGGTCGCGGCATTCAAGCGGGTCGAG
TGTGGATAAATTGCTACCATGCTTACCCAGCTCATGCCGCTTTTGGTGGCTATAAAAAATCGGGCATTGGCCGAGAAAAT
CATAAAATGATGCTCAACCATTATCAAAACACCAAAAACTTACTCATCAGTTATGATGTCAATCCGCTAGGATTTTTCTA
A

Protein sequence : 
MIYSQPGTDGAKMNFKPLYNNFIGGKWQPPVGGKYFDNGSPVNGEFFCQVPRSDGRDIELALDAAHTAFATWGKTSVTER
SNLLLKIADRVEQNIEYLAVAETWENGKAVRETLNADLPLFVDHFRYFAAAIRAQEGSAAELDMNTVAYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCIVLKPAEQTPASILVLLELIEDILPAGVLNVVNGYGTEAGQALATSKRIAKLAFTG
STAVGQHVLKCAAESLIPSTVELGGKSPNIYFADVLEHEDSYLDKAIEGMLLAFFNQGEVCTCPSRVLVQESIYDKFIEK
VIQRAKTIKQGDPLDTDTQVGAQASKEQFDKILSYLAIGKNEGAQVLIGGDPLQQSGSQAQGFYINPTILKGHNKMRVFQ
EEIFGPVIAVTTFKDEAEALAIANDTEYGLGAGLWTRDMNRAQRMGRGIQAGRVWINCYHAYPAHAAFGGYKKSGIGREN
HKMMLNHYQNTKNLLISYDVNPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-169 71
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-178 69
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-178 69
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-178 69
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-177 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sden_2339 YP_563342.1 aldehyde dehydrogenase VFG0082 Protein 1e-169 71