|
Name : Sden_2254 (Sden_2254) Accession : YP_563257.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : transposase, IS4 Function : - COG functional category : - COG ID : - EC number : - Position : 2676068 - 2677270 bp Length : 1203 bp Strand : + Note : - DNA sequence : ATGCGTGATATCCATATCTTACACGATTTAATCAAAAAACAATGCCCTCAAATACACCAAAAACGACTTAATTCTCTGAT GGTTGCCACTGAGTCACTCCTCGATGGTAATCAACTATCACTTACTCAGCTTGGTCGTAATATTACGGGCTCCGTGGCAG CTAAACACAACATTAAACGTATTGACCGACTCTTAGGTAATTATCACTTAGCTCAAGATAAAATAACAATATATCAGTGG CATGCTCGCTATCTTTGTGGCGCAAACCCTATGCCTATTATTCTCGTCGATTGGTCTGATGTCCGTGAACAGCTTCGAAT AATGACGCTACGCGCATCCATCAGCGTTCAAGGTCGCTCTGTGACTCTGTATGAACGGACTTTCTTGTTTGAGGACTACA ACGCACCTCGCAGCCATAATGCTTTTCTCGCTGAACTTGCCAACGTTTTACCTCAAGGTTGTTGTCCTCTGATTGTCACC GATGCAGGCTATCGCAATACCTGGTTTAGGGAAGTTGAGCGCTATGGCTGGTTCTGGCTTGGCAGAGTGCGAGGCGATGT AAGCTTTATGCACCACGGGCAAACCACTTGGCATTCAAATAAATCACTCTACTCAAAAGCAAACTCAACCGCTAAATACA TAGGTAATGTTCAGCTTGCACGTAAATCACCGCTAAGCTGCCATTTACATCTATTTAAGGCTAAGTCCAAATTACGTAAA GATAAGCGCTCTTCAAAAACGGGCCGAAACCACACCGCACAAAAGAGTTATCGCTTAGGCAGTAAGGAGCCGTGGCTGCT GGCGACCAACTTACCGCCTGAATACTTCAATCCAGCAAAAGTGGTTGAGCTATATGCTAAACGCATGCAAATTGAAGAAA CCTTTCGGGATTTAAAAAGCCCACAATATGGCATGGGATTGAGGCAAAGTCGCAGTCGGTGTCCAAAGCGATATGATGTA TTGTTGCTTATCGCTATGCTGGCAGAAATACTGTTGTGGTGTATAGGCATAGCCGCGAGGCATCTTGGCTGGCAGAAGGA TTTCCAAGCTAACAGCATCAAATATCGCGCTGTATTATCCGTTGTAAGATTAGGAAAAGAAGTGCGGCGAAGGCCAAAAT ACACACTAAAAGCATCGATAATTTACTGGGCATTAAACGAATATATCAAACTGGTTCATACCGCTGGCAGACCTAAATTA TGA Protein sequence : MRDIHILHDLIKKQCPQIHQKRLNSLMVATESLLDGNQLSLTQLGRNITGSVAAKHNIKRIDRLLGNYHLAQDKITIYQW HARYLCGANPMPIILVDWSDVREQLRIMTLRASISVQGRSVTLYERTFLFEDYNAPRSHNAFLAELANVLPQGCCPLIVT DAGYRNTWFREVERYGWFWLGRVRGDVSFMHHGQTTWHSNKSLYSKANSTAKYIGNVQLARKSPLSCHLHLFKAKSKLRK DKRSSKTGRNHTAQKSYRLGSKEPWLLATNLPPEYFNPAKVVELYAKRMQIEETFRDLKSPQYGMGLRQSRSRCPKRYDV LLLIAMLAEILLWCIGIAARHLGWQKDFQANSIKYRAVLSVVRLGKEVRRRPKYTLKASIIYWALNEYIKLVHTAGRPKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| IS1999 | CAJ77042.1 | Insertion sequence | Not tested | AbaR1 | Protein | 8e-97 | 53 |
| tnp | AEA34674.1 | IS10 transposase | Not tested | Not named | Protein | 1e-91 | 50 |
| IS10 | CAI43894.1 | transposase for IS10 | Not tested | LEE | Protein | 3e-92 | 50 |
| SF2983 | NP_708757.1 | iso-IS10R ORF | Not tested | SHI-1 | Protein | 4e-92 | 50 |
| tnp | AEA34664.1 | IS10 transposase | Not tested | Not named | Protein | 1e-91 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sden_2254 | YP_563257.1 | transposase, IS4 | VFG0647 | Protein | 2e-92 | 50 |
