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Name : Sden_2134 (Sden_2134) Accession : YP_563139.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 2532280 - 2533017 bp Length : 738 bp Strand : + Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGAAAGTTACCCTGTTGATCCCGGCCCGTTTCGGCTCTAGTCGTTTTCCGGGCAAGCCGCTTGCCCCGATTAATGGAAA GCCGATGATCCAGCACGTCTATGAGCGTGCATCCCTTGCCAAAGGGCTAGACGCTATTTATGTGGCAACCGATGATGATC GCATTAAAGATGCCGTTGAGGCATTTGGTGGCAAAGTCGTCATGACTAGCGCCGCTGCCGCCTCAGGCACGGATCGGATC AACGATGCCATAGAGCAGTTAGGCTTAAGCGACGACGATTTAGTCATTAACCTACAGGGCGACCAGCCTCTTATCGACCC GATTTCTATCGAGCAAATTGTTAGCTTGTTTGAACGTCATCCGGGTGAATTCGAAATGGCTACCTTAGGCTTTGAAATCA CAGACAAGAGTGAACTTGACGACCCCATGCACGTTAAAATGGTGTTCGATAATGACTTTAATGCCCTATATTTCTCCCGT GCCCGCATTCCTTTTGGCCGTGACACCAATGACTATCCTGTTTACAAGCACTTAGGTGTATACGCCTATACCAAACGTTT CGTGAATGCCTTCGCCAAGTTGCCATTAGGTAAGCTTGAAGATTTGGAAAAGCTTGAGCAACTGCGAGCCTTAGAATATG GCCATAAGATCAAAGTGGCTATCAGCGCCTTCGATTCACCGGAAGTGGATACCCCAGAAGATATCCGCAAGTGTGAGCAG CGTTTAGCCGTCGACTAA Protein sequence : MKVTLLIPARFGSSRFPGKPLAPINGKPMIQHVYERASLAKGLDAIYVATDDDRIKDAVEAFGGKVVMTSAAAASGTDRI NDAIEQLGLSDDDLVINLQGDQPLIDPISIEQIVSLFERHPGEFEMATLGFEITDKSELDDPMHVKMVFDNDFNALYFSR ARIPFGRDTNDYPVYKHLGVYAYTKRFVNAFAKLPLGKLEDLEKLEQLRALEYGHKIKVAISAFDSPEVDTPEDIRKCEQ RLAVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-41 | 44 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-41 | 44 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-41 | 44 |
