Gene Information

Name : Sden_2092 (Sden_2092)
Accession : YP_563097.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaC
Function : -
COG functional category : R : General function prediction only
COG ID : COG2056
EC number : -
Position : 2486362 - 2487699 bp
Length : 1338 bp
Strand : +
Note : -

DNA sequence :
ATGAATGCGGTTGTAATTGCAGTGAGCCTGATGCTCATCTTAAGTTTAATGCGTGTGAACGTGGTTATCGCGTTAACAGT
GAGTGCCCTAGTGGCAGGATTTGTTGGCGGCTTGCCCTTGGCAGAAACCATTTCAGCCTTTAATGACGGCCTTGGCGGCG
GCGCTCAAATTGCCTTAAGTTACGCCTTGCTCGGCGCTTTTGCTGCCGCGTTAAGTCATTCAGGTTTAACTCAGCTTATT
TCTACAGCCATCATCAGCAAATTGGGTCAAGAGCCAAACAGCCGAAATACCCAAGTGGTGCGCGCCTTGCTTATCACGGC
CATTTTGCTGATGGCGATATCCTCACAAAATATTTTGCCTATCCATATCGCCTTTATTCCAATTTTAATCCCGCCGCTGC
TGCATGTCATGACCAAGCTCAAGCTCGACAGACGCTTGATAGCTTGTGTGCTGACCTTTGGCTTAGTCACTACCTATATG
ATTTTACCTATCGGATTTGGCGGCATTTTCTTAAATGACATTCTACTCGCCAACTTAACCACTAATGGCCTAGATGCAAT
TAAGGGGCAGATCCCCAAGGCCATGTTACTGCCGGCATTAGGCATGATATTAGGTTTATTCATTGCCGTGTTTATCAGCT
ATCGCAAGCCAAGAGCTTACCCAAGCAAAGAGATAGACAAAGAGCAAGCCATAGCCCCAGATGCGGATGTTACCCAGCTA
AACCGCCGTACAATTTTAGTGTCCCTTAGTGCCATAGTGCTGACGTTAATGGTGCAGCTGTATACAGATTCGATGATTTT
TGGCGCATTAGCAGGCTTTGTGGTGTTTCGCTTCTCAGGCATCATTAAAAAAGACATCAGCCAAGACTTGTTTAATCAAG
GGGTGCACATGATGGCTAACATTGGCTTTATTATGATTGCAGCCGCAGGTTTTGCCGCCGTGGTTAAAGCCACTGGTGAA
GTGAGTACCCTAGTGAGTTCATTAGGTGACATTATCGGGGATAACAAGGCCTTAGCAGCGCTACTTATGCTAGTGGTGGG
CTTATTGATCACCATGGGCATAGGCTCATCCTTCTCAACCATACCCATTATTGCCACCATTTATGTGCCCTTAGCCTTAA
GCTTTGGCTTTTCTGTGACCGCCACCATTGCCTTAGTGGGCACAGCCGCGGCCCTTGGGGATGCGGGCTCTCCCGCATCG
GATTCAACCTTGGGGCCAACTGCCGGGCTCAATGTGGATGGCCAGCACGACCATATTCGTGACAGCGTGATCCCGACGTT
TATTCACTATAATATTCCGCTAATAATTTTTGGCTGGATAGCCGCCATGACGTTATAA

Protein sequence :
MNAVVIAVSLMLILSLMRVNVVIALTVSALVAGFVGGLPLAETISAFNDGLGGGAQIALSYALLGAFAAALSHSGLTQLI
STAIISKLGQEPNSRNTQVVRALLITAILLMAISSQNILPIHIAFIPILIPPLLHVMTKLKLDRRLIACVLTFGLVTTYM
ILPIGFGGIFLNDILLANLTTNGLDAIKGQIPKAMLLPALGMILGLFIAVFISYRKPRAYPSKEIDKEQAIAPDADVTQL
NRRTILVSLSAIVLTLMVQLYTDSMIFGALAGFVVFRFSGIIKKDISQDLFNQGVHMMANIGFIMIAAAGFAAVVKATGE
VSTLVSSLGDIIGDNKALAALLMLVVGLLITMGIGSSFSTIPIIATIYVPLALSFGFSVTATIALVGTAAALGDAGSPAS
DSTLGPTAGLNVDGQHDHIRDSVIPTFIHYNIPLIIFGWIAAMTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 3e-85 56
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 3e-85 56
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-85 56
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-85 56
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 2e-92 56
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 2e-92 56