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Name : Sden_1770 (Sden_1770) Accession : YP_562777.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2092233 - 2094293 bp Length : 2061 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCATCGCGTCGTGAAACCCGTGCTAGTGCACAAACATTTATTGAAAATCTAAAACCTTTACAACACCCCAATTCTGA GAAGGTATTCCTTAGCGGAAGCCGCCCAGATCTTAGGGTGGGCATGCGTCAAATTCATCAGACCGACACTCTGCACGCAA AAACCAATGGTGAGACGCTGCGGGAGCAAAATCCGCCTATCATGGTTTATGATTGCGCTGGTGCATATTCTGATCCCAAT GCCGATATTAATGTCCATGCAGGTCTTGAAAAATTTAGGCAGTCTTGGATTGAAGAGCGTCAAGATACTGAGCTGCTTAA GGGGGTGAGCTCACAATTTACCCAGCAGCGTTTAGCAGATGATGGTCTAGATCATTTGCGTTTTGATGCACTTGTCAAAC CAAGACGAGCTAAAGCCGGACGATGCGTGACCCAAATGCATTATGCAAGACGGGGGATCATTACCCCTGAGATGGAATAT ATTGCCATACGTGAAAACATGGCCCGTGAACATGTCCCAGAAGGGGTGTTAACCCAAAAATCTGCTGGTGAATCCTTTGG TGCTTGCATAGGAGAGCCCATCACGGCTGAATTTGTGCGCTCCGAAGTGGCTCGGGGCCGCGCTATTATCCCGCTAAACA TCAATCACCCAGAAGCTGAACCTATGATCATAGGTCGCAATTTCTTAGTTAAGGTGAATGCCAATATCGGTAATTCTGCA GTGACTTCCTCCATCGAAGAAGAAGTGGAGAAGCTAGTTTGGTCTACCCGCTGGGGCGCAGATACTGTGATGGACTTGTC CACCGGGCGCTATATTCATGAAACCCGTGAATGGATCATTCGTAATTCTCCTGTACCCATAGGTACTGTGCCCATCTACC AAGCGTTAGAAAAAGTAAATGGGGTCGCCGAAGATCTTAACTGGGAAGTGTTTCGCGATACCCTAATTGAACAGGCCGAG CAAGGAGTGGATTACTTCACTATCCATGCTGGTGTGTTACTCAGGTACGTCCCCATGACAGCAAAACGCTTAACGGGCAT AGTGTCTCGGGGCGGTTCTATCATGGCAAAATGGTGTCTGAGCCATCATAAAGAAAGCTTTTTATATGAGCACTTTAGAG AAATCTGTGAACTGTGCGCCGCCTATGATGTGTCGCTGTCCCTTGGTGATGGTATGCGCCCAGGCTGCATAGCTGACGCT AACGATGAAGCCCAATTTGCAGAACTTGAAACCTTAGGTGAGTTAGTGAAAATTGCCTGGGAATACGATGTGCAAACCAT TATCGAAGGCCCAGGTCATGTGCCTATGCACTTGATTAAAGTGAACATGGAAAAGCAGCTTGAGCACTGTGATGAAGCGC CGTTTTATACCTTGGGCCCGCAAACCACAGATATTGCACCTGGGTATGATCATTTCACCTCAGGCATAGGTGCCGCTCAA ATGGCTTGGTATGGCTGCGCCATGCTGTGCTATGTCACCCCAAAGGAGCATTTGGGGCTGCCCAATAAAGAAGATGTTAA ACAAGGGCTTATCGCATACAAAATTGCTGCTCACGCCGCTGACATTGCCAAAGGCCACCCGGGGGCGCAAGTGCGTGACA ATGCTTTGTCGAAAGCTAGGTTTGAGTTCCGCTGGGAGGATCAATACAACCTAGGGTTAGATCCAGATACTGCTCGTGCG TACCACGATGAATCTTTACCCCAAGAATCCGCTAAGGTGGCGCACTTTTGCTCTATGTGTGGGCCTAAGTTTTGCTCGAT GAAAATCACCCAAGAAGTCAGAGAATACGCCGCCGATCAAGAAGCGAAAGCGCTGTTAGCACAAGCACCGTTAGCACAAG CTAATATTCAGGATGTTGAACTTATTAGTCCTGATGAGTATAAGGCGCGCCAAGCCACAGAAGCAGATCTTGCTAAGGCA ATGGCACAAAAGTCGGCTGAGTTTAAATCCCAAGGCTCAGCCCTGTATCACAGCATTGACAGCAGCGGAATTAACGACAA CAAAAATGATCAACAAGATGCAAGTGTTGTCCGAGTCCCAAGCCTCGAAATTGAGGGCTAA Protein sequence : MSSRRETRASAQTFIENLKPLQHPNSEKVFLSGSRPDLRVGMRQIHQTDTLHAKTNGETLREQNPPIMVYDCAGAYSDPN ADINVHAGLEKFRQSWIEERQDTELLKGVSSQFTQQRLADDGLDHLRFDALVKPRRAKAGRCVTQMHYARRGIITPEMEY IAIRENMAREHVPEGVLTQKSAGESFGACIGEPITAEFVRSEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSA VTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLNWEVFRDTLIEQAE QGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKESFLYEHFREICELCAAYDVSLSLGDGMRPGCIADA NDEAQFAELETLGELVKIAWEYDVQTIIEGPGHVPMHLIKVNMEKQLEHCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAQ MAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADIAKGHPGAQVRDNALSKARFEFRWEDQYNLGLDPDTARA YHDESLPQESAKVAHFCSMCGPKFCSMKITQEVREYAADQEAKALLAQAPLAQANIQDVELISPDEYKARQATEADLAKA MAQKSAEFKSQGSALYHSIDSSGINDNKNDQQDASVVRVPSLEIEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 73 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 73 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
