Gene Information

Name : Sden_1677 (Sden_1677)
Accession : YP_562684.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1951093 - 1951794 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACCAGCGTCGACCCGCTTATTAGCCATTAATGCCGTGAGTAAAGTATTTCATGATGGTGCCTGTGAAACTCAGGT
GCTCCATGAGGTGAATTTAACGGTGCATCGCGGTGAGCAGCTTGCCATAGTGGGCAGTTCAGGTTCGGGTAAGAGTACCT
TACTGCATATTATGGGCACCTTAGAAAGCCCAACCTCTGGTACTGTGCTATTAGAAGGTGAAAATTTACACCAGCTGTCA
TCCAAGCGCCAAGCGCAAATTCGTAATCAAGATTTAGGCTTTATTTATCAGTTTCATCACCTATTGCCTGAGTTTAGCGC
CTTAGAAAATGTGGCTATGCCGGCGTTTATTCAAGGTAAGAATAAAGCTCAAACCTTGGCTGAAGCTAAAGCCCTGTTAG
AACGAGTGGGGCTAGGTCACAGATTAACCCATTTACCCTCGCAATTATCCGGCGGTGAGCGCCAACGGGTGGCCATCGCA
AGGGCACTTATCAATAAACCTAAATTGGTATTGGCCGATGAACCTACGGGGAATTTAGACGCTGTCAGTGGGGAAGCTGT
CTACGGACTTATTCGTGAACTTGCCGAGCAGCTTGGAACCGCCTTCGTGGTGGTGACTCACGATGCCAACCTTGCCGCCA
GAATGGACAGACAAGTGAACATGAAAGACGGCATCTTATCCCAGAGTGAGACCCATCGATGA

Protein sequence : 
MKPASTRLLAINAVSKVFHDGACETQVLHEVNLTVHRGEQLAIVGSSGSGKSTLLHIMGTLESPTSGTVLLEGENLHQLS
SKRQAQIRNQDLGFIYQFHHLLPEFSALENVAMPAFIQGKNKAQTLAEAKALLERVGLGHRLTHLPSQLSGGERQRVAIA
RALINKPKLVLADEPTGNLDAVSGEAVYGLIRELAEQLGTAFVVVTHDANLAARMDRQVNMKDGILSQSETHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sden_1677 YP_562684.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 1e-42 43
Sden_1677 YP_562684.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 1e-34 43
Sden_1677 YP_562684.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 8e-39 41