Gene Information

Name : Sden_1589 (Sden_1589)
Accession : YP_562596.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0697
EC number : -
Position : 1849079 - 1850053 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACACCCTCGCTCTGGTTTAACCTATTACTCACCAGCCTAGCGCCATTAGTCTGGGGCAGTACCTATATTGTCAC
CACTCAGATGTTACCCGCTGACTTACCCTTGCTGGCCTCGACTCTGCGCGCCTTGCCTGCTGGCTTATTGCTGGTGATGA
TTTACCGAAAAATGCCTATCGGGCATTGGTGGCTAAAAATAGCCCTCTTAGGCATGCTCAACATAGGGGTGTTTTTCTAC
TGCCTCTTTAGCGCAGCCTATTATCTGCCAGGCGGGACAGCCGCCGTTATCATGTCTTGCCAACCTTTACTGGTTATGGC
GCTAAGTGCCTTGCTATTTAAAGAGAAGATAACCTTAGTCAGCATCATTGCCTTAGCCCTAGGGGTCGCGGGAATTGCCT
TACTCGCACTGAAAGGGAACATGGTGCTCAATCTGCAAGGTATCGCTTTTGGCTTGGCGGGAGCTGCCAGTATGGCGTTG
GGTTTAGTACTGACTAAGTATTGGGGTAAACCGGCTAATTTTAGCTTGATTGATTTTACCGGTTGGCAGCTCACCTTCGG
CGGCATGGCTCTGCTGCCAATCACCCTGTATCTGGAAGGAATCCCCCCGAGCCTGACAGAGGTAAATATCTTAGGTTACA
GTTACCTATGTATTATCGGCTCGGTAGTGGGTTATATGATCTGGTTTAGAGGAATTGCACACTTGCCAGTCGTGACCAGC
TCATTCCTCGGTTTTTTAAGCCCGATTTCAGCAGGGGTATTGGGTTATCTCATCTTAGATGAGCAACTAACCCCAATGCA
GTGGCTTGGTGTCTTGGCTATTCTAATAGCCATTTTACTGAACCGAGTGACCAGCCAAAAGAAAGCTAAGCCTCAGACAC
CAGCGAGTGCTCCAAAAACAGAGTTAATGAACGCTAATTTAGTAGGTAATGGACTTGATAGGAAAGACGAGATGAATGCA
ACAAGATTTATTTAG

Protein sequence :
MKTPSLWFNLLLTSLAPLVWGSTYIVTTQMLPADLPLLASTLRALPAGLLLVMIYRKMPIGHWWLKIALLGMLNIGVFFY
CLFSAAYYLPGGTAAVIMSCQPLLVMALSALLFKEKITLVSIIALALGVAGIALLALKGNMVLNLQGIAFGLAGAASMAL
GLVLTKYWGKPANFSLIDFTGWQLTFGGMALLPITLYLEGIPPSLTEVNILGYSYLCIIGSVVGYMIWFRGIAHLPVVTS
SFLGFLSPISAGVLGYLILDEQLTPMQWLGVLAILIAILLNRVTSQKKAKPQTPASAPKTELMNANLVGNGLDRKDEMNA
TRFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM AGK07028.1 PecM Not tested SGI1 Protein 7e-39 50
pecM AGK07086.1 PecM Not tested SGI1 Protein 7e-39 50
pecM ACN81012.1 PecM Not tested AbaR5 Protein 9e-39 50
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 7e-39 50