Gene Information

Name : Sden_1574 (Sden_1574)
Accession : YP_562582.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 1831344 - 1832285 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTATCAGCAGTTGACTGAGGGAAGAAGATATCAGATTTCAGTCCTTTTAGACCAGGGTATTTCGATAACTTTGAT
TGCAAAAGCTATCAATTGTCATCGTGCGACTGTCTATCGAGAACTAAAACGTTGTCATGCCCTGCAGGGTTATTGTCCTG
ACAGCGCTCAAGCCAGTGCGTGTAAGATGCGGCGTCATTCAGCCAAATATACGATCCCCGATACAAGAATAAACGTCGTC
CGCTTCCTACTGCAACATGATTGGAGCCCAGAGCAGATTTCACGGGTGTTATCGGGCATGAACCAAGCGGTTAGTCATGA
ATGGATTTACCGCTTTGTGGCAAGAAATAAACGTCAAGGCGGCAAGCTATATCGCCACCTACGGCAGGGTCATAAGCGCT
ATCGCAGAGGTAAAAAAGAGAAAGCGCCAGCGATTAAAAATGGTACCTCTATCGACTCTAGACCTGCCATCGTTGATACC
CGTGAGCGTTTTGGTGATTGGGAAATCGATACCGTATTAGGCAAGCATGGGACAGGTTCAATCGTGACAATTTTAGAGCG
AAAGACCCGTTTTTATTTAATAAAGAAAGTGGCCTCAAAATCTGCTGAAGATGTGACTAAAGCGACTATCGAATTATTGA
TGCCCTATAAGCAATATGTGCACACTATAACTGCCGATAATGGTCGTGAATTCGCTCATCATGAAGTCATAGCCAACGCG
CTAGATACCTCGTTTTACTTTGCTCATCCGTATAGTTCTTGGGAACGTGGCGCCAATGAAAATGCCAACGGTTTATTAAG
GCAGTATGTAAAAAAAGGGACTGACTTAAGGACAGTAAGCGACGCCATCATCTTATTTGCCCAGAACAGGATTAATTACA
GACCTAAGAAATGTTTGAAGTTTAAGCAGCCAGCTGTTGTGTTTAAACAATTAGCCGCTTAA

Protein sequence :
MSYQQLTEGRRYQISVLLDQGISITLIAKAINCHRATVYRELKRCHALQGYCPDSAQASACKMRRHSAKYTIPDTRINVV
RFLLQHDWSPEQISRVLSGMNQAVSHEWIYRFVARNKRQGGKLYRHLRQGHKRYRRGKKEKAPAIKNGTSIDSRPAIVDT
RERFGDWEIDTVLGKHGTGSIVTILERKTRFYLIKKVASKSAEDVTKATIELLMPYKQYVHTITADNGREFAHHEVIANA
LDTSFYFAHPYSSWERGANENANGLLRQYVKKGTDLRTVSDAIILFAQNRINYRPKKCLKFKQPAVVFKQLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02710 YP_005176177.1 ISApl1 transposase Not tested ICEPmu1 Protein 3e-42 41
NMB1770 NP_274770.1 IS30 family transposase Not tested IHT-C Protein 4e-46 41