|
Name : Sden_1571 (Sden_1571) Accession : YP_562579.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1828448 - 1829299 bp Length : 852 bp Strand : - Note : - DNA sequence : ATGATGTGCGAAGTAAAGAAAGCAAACCCCGAGTTTAAAGTGAATGAGTTATGTCGCGCCTTCGAAATAAATTGCAGTAG TTTTTATTATAAACCAATACCGTTAAGTATTAAGAAACAGTCAGTTATGCAGTTGGTTGAGGAAGTTTTCACTGATTCTT ACTCTACTTATGGCAAACGAAGAATACAGGCTGAACTACTTGATTTAGATTGTAGAGTAGGTGTTTACGCTATTTCTACG GTCATGAAAAACTTGGGGCTAAGGGCGATTAGGCCAAAGAAAAAGCATTACTATCCTAACCAAGGTGAGGAGCAAGTTTA CGCCCCTAATTTGCTTAGACGACAGTTTAATCCTACGACTTATAATACTCACTGGGTTGGTGATATTACCTATATAAAAT CACATCAAGGCTGGAGTTATTTAGCCTGTGTGCTTGATTTAGGAACCAAAGAGATCGTTGGATATGCTTTATCAAGTCAA CCCAATGCAGCATTAGCGACAGCGGCCTTAAATAACGCGATACAACGTAAGAGGCCCAATACACAGGCATTGATGTTTCA CTCCGACCAGGGCTGTCAGTACTCAGCCAAAGTGTTTAGAGAGCGGCTAAAACACTTAGGTATCGAGCAAAGCATGAGTC GTAGAGGCAATTGCTGGGATAATGCGGTGATGGAACGATTTTTTAGGAGTTTAAAGACTGAAAGATTAAACCATTTAGCA TTTATAAATCACAGCGCAGTAGTGAGCGTGGTTGAGCAATATATTCAGTTCTACAATTACAAACGCAGACATTCGGCAAT AGATTATAAGACGCCACATCAAAAATATAATGAGTTAAAAAAAGCGGCTTAA Protein sequence : MMCEVKKANPEFKVNELCRAFEINCSSFYYKPIPLSIKKQSVMQLVEEVFTDSYSTYGKRRIQAELLDLDCRVGVYAIST VMKNLGLRAIRPKKKHYYPNQGEEQVYAPNLLRRQFNPTTYNTHWVGDITYIKSHQGWSYLACVLDLGTKEIVGYALSSQ PNAALATAALNNAIQRKRPNTQALMFHSDQGCQYSAKVFRERLKHLGIEQSMSRRGNCWDNAVMERFFRSLKTERLNHLA FINHSAVVSVVEQYIQFYNYKRRHSAIDYKTPHQKYNELKKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 3e-38 | 46 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-38 | 46 |
