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Name : Sden_1238 (Sden_1238) Accession : YP_562247.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Virulence Product : phospholipase D/transphosphatidylase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1112 EC number : - Position : 1444021 - 1447557 bp Length : 3537 bp Strand : + Note : - DNA sequence : ATGACTTCAATGAGTTACATACAATGGGCGAGTTATTGGCGTAACTCGCTGGCTGATGCAGAATCAGGCAAAGGGGCATT AAGGGCAAGTGAATGTGAATCTTTTTTAAAGGTCGACCGTGACGTCAGGCAAACGGGTGTGTTACCTAAAACATCGGTAG AGCAGCTGTTTAAAGGCGTAGCAAAAGAAATCAATGCGGTAAATGTAATATATCGGCCAAATGTATTAGTGCTGACATTA CAACATGGAAAAAGTCATCAAGGCAGCTTGCCTGAAATACTCACGGCTTTAGCTTGCCCTATGTGGGTCAATAGGCAAGG CTACCTTTTCCCCTCAGGCCCAGCCGTTGTGCCCAGAGATTTATTGCATCCCCAAGATGATATTAAGTTTACCGTCGGTT GCGTGGCTGATCTTGATGCTCACCTTACGACGCATCAACTAAAAACCTTTACTAAAGATCAAGTTCACGATCAGGTTGAT GATGACAAGTTGGCCGATTTTAAAAAAGACTGGCTGGCATTTATCGAACATTGCAGCTTACTTTATCAAAATGTGTGTAA AGCATTGGGCTTGACAGATATTCAAGACTTTTATTCGATAGCCAATTACTCGTGGATACAAGCTGTTGATACAGTGTCAG GTATGTCAGTAAATATACTTAAACTTTATGACTCAATTACCAGTATCAAACCTGAACTAGCCCTTTTTTATAGTTATTCA ACTGTTTCCAACGTCAATCATAAGCCCTGTATGGATTTTTCTGAGTCAGTGAGCCTGAGGTTAGGTCATTCGAGTGATAA GTATTGCTTGGCTGATGCGCAGCGCGATGCCTTGTCTCATTCTTTAGCGATGAATAATGGTGACATACTTGCGGTTAATG GCCCACCAGGCACAGGCAAAACCACCTATTTACTCTCAGTGGTGGCTTCTCTATGGGTAAAAGCGGCGTTAGAGCAAAGT AAGCCTCCAGTTATTGTGGCGGCATCAACCAATAATCAAACCGTCACTAATATTATCGATGCTTTCGGAAAAGACTTTTC TGAAGGGGAAGGTACCTTGAGTGGGCGCTGGTTGCCTGATATTACTAGCTATGGCGCATATTTCCCCTCACCAAGCCGCT TAGCAGAAGCACAGAAAAGCTTTCAAACTCAAAGCTTTTTCGCTGAAATAGAAGATTTAGATTATCTTGAGCGTGCAGAG CACTATTTCTTGCAACAAGCGATACTGTATTTTAACTCTGACGCTGTGTTGGTACTTGTCGACATTAAAGCCCGCCTTCA TAAAGAATTATTGCAATGTCAGTCAAGCTTGAAGCGTATCGAATCACTTTGGTCTGAACTGTGTAAGGCGAATGCGTTAA TTCTTGCGATGATAGGTACTGAACCAGAAAGTCAGTTAGCCGAATTAAAAGCAGCGAGTCATCAACATAAACAACAGTCA ACGGATATAAAAAGTGCGCTAAAACAATGGCAATACTTTTTGGCCAATGAATCAATTTGGTTGTCACTCTTCAGTTGGCT TAAACCTGTTAGAGACAAAAAAAATCGCCAGCGTGAACTCTATATCGCTACATTTAGTGATGACATTCGCTCGTTAGTCG CTCTTGCTAGTCCAGATTTTGAACTAGCAGAAAGTGAATTTAAAAAGGCGATTCAGCAACAGGATCAAACTCATCAACGA CTGCTTCAAGAGTATCAAGATAAAAAGCAACTGCTTGAAAAACGAAACGAAGTCCAGGCGCATTGGCAAGCGTTAGCTTG TTCCATAGGCTTAGAAAAAGACGCATTGTATGATCTTAATGCTGTCGATAAAAAAGCAGATACCGCCATTCGTTTTGTGA TGTTTCGCTTAGCGGTACATTATTGGGAAGCCTGTTGGTTGATCGAGGGCCGTAAACTTGGCGATGAACTCAATAAAATA AAGGGTAAAACGGGCAGAAAAACCGTGGTACCAAGGTGGCATCGCCGCATGATGCTTACCCCCTGTATTGTTTCTACCTT CCATGCTTTGCCTGCTCATATGACTTGTTCTGCATTTAATGATGGTAAATTTGACCCTGAATATCTTTTTGATTTTATTG ACTTGTTGGTTGTTGATGAGGGCGGGCAGGTGTCACCAGATGTGGCTGGAGCCTCGTTTTCTTTGGCTAAGAAGTCATTA GTTATTGGCGATATTCATCAGATTGAACCTGTGCGCTCGGTTTCTGGCAGTATTGATATAGGCAATTTATTCAATGCAAA TTTGCTTGAAAAGCGACAGGACTATGAAGCTGTGCAAGCGAATGGCCGAAGTGTTGTCAATGGTAGTGTTATGCACATAG CACAGGCTGCAAGTCAGTACTGTTATCAGGCTGAAATGGAGCCTGGGATGTATTTACGAGAGCACAGACGTTGCTTTGAT GACATTATCAAATTTTGTAATGAGCTTTGTTATAAGGGGGTTTTGGAACCTAAAAGGGGAGATGCAGCGGATGCTTTATT TCCTGCTTTTGGCCATCTTCACATTGATGGCAGAGCTGAACAACAAATGGGTGGCAGCCGTTTTAATCGTCTGGAAGCTG AGACGATTGCAGATTGGCTGGCACAAAATAAAACTAAGCTTGAATCAAGATATAACAAACCGCTTGAGGATATTGTTGGC ATAGTTACGCCGTTTTCTGCTCAGGTGAATGAGTTGCAGCAAGCTTGCAAAAATAAAGGGATTGAAAGCGGAAAGCAGCA AGGGCAACTGACCATAGGTACTGTGCATGCATTACAAGGCGCGGAAAGAATTATTGTGATTTTTTCCCCTGTGTATACAA GACATAGTAACGGTGAATTTATTGACCGTTCAACAAGCATGTTGAATGTTGCTATATCAAGAGCTAAAGATAGCTTTTTA GTTTTTGGTGATCTGGATGTGATATCTGCAGCCTCATCAACATTGCCGCGAGGTATTCTGGCAAAATATTTATTTTCAAA GCCTGAAAATGAACTGGTATTTAAAATCAACAAACGCAGAGATCTGTTAACTTTTTGTGCAGAGCCAAGGTTGATAAATG ATGCGCTGGAACACGACCAATATTTAATTGAGCTTCTTGAGCAGGTTAAAGAGACGATTTATATCGTGTCTCCATGGGTC AGTTATCTAAAATTGATGGAGACTGGCATTCTCAGTTCGATTTGTGAGGCATCTTCAAGAGGGGTAAAGATAAAGCTGTT TACGGATAGGCATTTCAATACCACGATAAATAATCATTTTGATGCAGAAAAAGAAAAAATGTTTATTCAATGTTGTGAAA AACTAGCCGATGAAGGTGTTGATGTGGCTGTGATCCGTGGCGTTCATAGCAAGTTAGTGATGGCAGATAATCATCATATG AGTGTGGGTTCTTTCAATTGGTTTAGTGCTTCTCGATCTGGAATATATGCCAACATGGAAACTTCAATGATTTACTCAGG TGATTTGAGAAAAGAAATTAATACTCAAACTGCTTTTTTGAATTCACGAGTAGATAAATTATATCAATGTAGTAAAGACG GCGCCTTGGTTCTCTAG Protein sequence : MTSMSYIQWASYWRNSLADAESGKGALRASECESFLKVDRDVRQTGVLPKTSVEQLFKGVAKEINAVNVIYRPNVLVLTL QHGKSHQGSLPEILTALACPMWVNRQGYLFPSGPAVVPRDLLHPQDDIKFTVGCVADLDAHLTTHQLKTFTKDQVHDQVD DDKLADFKKDWLAFIEHCSLLYQNVCKALGLTDIQDFYSIANYSWIQAVDTVSGMSVNILKLYDSITSIKPELALFYSYS TVSNVNHKPCMDFSESVSLRLGHSSDKYCLADAQRDALSHSLAMNNGDILAVNGPPGTGKTTYLLSVVASLWVKAALEQS KPPVIVAASTNNQTVTNIIDAFGKDFSEGEGTLSGRWLPDITSYGAYFPSPSRLAEAQKSFQTQSFFAEIEDLDYLERAE HYFLQQAILYFNSDAVLVLVDIKARLHKELLQCQSSLKRIESLWSELCKANALILAMIGTEPESQLAELKAASHQHKQQS TDIKSALKQWQYFLANESIWLSLFSWLKPVRDKKNRQRELYIATFSDDIRSLVALASPDFELAESEFKKAIQQQDQTHQR LLQEYQDKKQLLEKRNEVQAHWQALACSIGLEKDALYDLNAVDKKADTAIRFVMFRLAVHYWEACWLIEGRKLGDELNKI KGKTGRKTVVPRWHRRMMLTPCIVSTFHALPAHMTCSAFNDGKFDPEYLFDFIDLLVVDEGGQVSPDVAGASFSLAKKSL VIGDIHQIEPVRSVSGSIDIGNLFNANLLEKRQDYEAVQANGRSVVNGSVMHIAQAASQYCYQAEMEPGMYLREHRRCFD DIIKFCNELCYKGVLEPKRGDAADALFPAFGHLHIDGRAEQQMGGSRFNRLEAETIADWLAQNKTKLESRYNKPLEDIVG IVTPFSAQVNELQQACKNKGIESGKQQGQLTIGTVHALQGAERIIVIFSPVYTRHSNGEFIDRSTSMLNVAISRAKDSFL VFGDLDVISAASSTLPRGILAKYLFSKPENELVFKINKRRDLLTFCAEPRLINDALEHDQYLIELLEQVKETIYIVSPWV SYLKLMETGILSSICEASSRGVKIKLFTDRHFNTTINNHFDAEKEKMFIQCCEKLADEGVDVAVIRGVHSKLVMADNHHM SVGSFNWFSASRSGIYANMETSMIYSGDLRKEINTQTAFLNSRVDKLYQCSKDGALVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SF2965 | NP_708739.1 | superfamily I DNA helicase | Not tested | SHI-1 | Protein | 0.0 | 43 |
| unnamed | CAD42018.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 0.0 | 43 |
| S3169 | NP_838460.1 | superfamily I DNA helicase | Not tested | SHI-1 | Protein | 0.0 | 43 |
| ORF_2 | AAZ04413.1 | superfamily I DNA helicase | Not tested | PAI I APEC-O1 | Protein | 0.0 | 43 |
| APECO1_3532 | YP_854230.1 | superfamily I DNA helicase | Not tested | PAI I APEC-O1 | Protein | 0.0 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sden_1238 | YP_562247.1 | phospholipase D/transphosphatidylase | VFG0627 | Protein | 0.0 | 43 |
| Sden_1238 | YP_562247.1 | phospholipase D/transphosphatidylase | VFG1537 | Protein | 0.0 | 43 |
