Gene Information

Name : Sden_0124 (Sden_0124)
Accession : YP_561144.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 136274 - 136708 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACAGAATCGCAAACAACAAGGTTTTACCCTATTAGAAGTCATGGTCGTTATCGTGATTTTAGGTATTTTGGCCTC
TATGGTAGTGCCTAACCTTATGGGTAACAAAGACAAGGCTGACCAACAAAAAGCCGTGTCAGACATAGTGGCATTAGAGA
ATGCCTTAGACATGTACAAGTTAGACAACAGCTATTACCCAACTACAGATCAAGGCTTAGATGCCTTAGTCAATGCGCCA
ACCTCGTCACCTGAAGCCCGTAATTATCGTGAAGGTGGTTATGTGAAGCGTCTGCCACAGGACCCTTGGGATAATGCCTA
TTTGCTACTTAGCCCAGGCGAGCAAGGTAAGATAGACATTTTCAGTGCAGGACCGGATCGTCAGCCGGGCACAGAAGATG
ATATTGGCAGCTGGAACCTGCAAGACTTTCAATAA

Protein sequence : 
MKQNRKQQGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNSYYPTTDQGLDALVNAP
TSSPEARNYREGGYVKRLPQDPWDNAYLLLSPGEQGKIDIFSAGPDRQPGTEDDIGSWNLQDFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-44 66
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-44 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sden_0124 YP_561144.1 general secretion pathway protein G VFG2050 Protein 2e-44 65
Sden_0124 YP_561144.1 general secretion pathway protein G VFG1871 Protein 2e-32 54
Sden_0124 YP_561144.1 general secretion pathway protein G VFG0180 Protein 3e-32 53