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Name : Sden_0123 (Sden_0123) Accession : YP_561143.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 134969 - 136192 bp Length : 1224 bp Strand : + Note : - DNA sequence : ATGGCAGCCTTCGAATATAAAGCCTTAGATAAACAGGGCAAGCAGCAAAAAGGCGTTATCGAAGCCGATACCGCCAGACA CGCTCGCAGCCAGCTTAGGGATCAGCAGTTAATGCCCCTAGAGCTTAGCCAAGTCAATGAAAAAGAGTCTAAGGCCGGAG GTCAAGGCTTTAGCCTATTTAAGCGCGGCATTCCCGTGGCCGACTTAGCCTTGATCACTCGCCAAATTGCCACCTTAGTG GCGGCCGGTTTACCTATTGAAGAGGCCTTAAAAGCCGTGGGTCAGCAATCTGAGAAAGACCGTCTCGGCAGCATGATCAT GGCGGTGCGCTCACGGGTGGTAGAAGGTTATAGCTTAGCCGATTCCTTGGCCGAGTTTCCGCATATTTTCGACGATCTTT ACCGCGCGATGGTGGCCTCCGGTGAGAAGTCGGGCCATCTCGAAGTGGTGCTTAATCGTCTTGCCGATTACACAGAAAGA CGCCAACAGCTTAAATCTAAACTCACCCAAGCCATGATTTATCCTGTGGTATTAACTCTGGTCGCCATAGGTGTGATTGG GGTACTTTTAGCCGCAGTGGTGCCCAAAGTCGTCGGCCAGTTCGAGCACATGGGCCAAGAGTTGCCGGGCACCACACAGT TTTTGATTTTGGCATCGGACTTTGTTCAAAGTTATGGTGTCTTAGTCATAGGCCTGATTGTGCTGTTATCAATTGGTTTG CAACGGTTACTCACCAAACCCTTATACCGAATGAAATGGGATACCCTGCTGCTAAGCATGCCTGTGATAGGTAAAGTCAG TAAGGGCCTAAATACGGCTCGTTTTGCTCGAACGTTAAGTATTCTATCGGCAAGCTCAGTGCCTTTATTGGATGGCATGC GTATCGCTAGCGAAGTCTTGCAAAATGTGAAAGTGCGCGCCGCTGTGGATGAAGCCACCGCTAGGGTTCGCGAAGGTACT AGCCTCGGGGCTGCACTCACGCAAACCAAACTGTTTCCCGCCATGATGCTCTATATGATCGCCTCAGGTGAGAAGAGTGG TCAGCTGGAAAACATGCTCGAGCGCGCCGCAGATAACCAAGACAGAGAATTTGAAGCCAACGTCAATATCGCCTTAGGGG TGTTTGAGCCTATGCTGGTTGTCAGCATGGCAGCTGTGGTCTTGTTTATTGTCATGGCCATCTTGCAGCCCATATTAGAA TTGAACAACTTGATCAGTGGCTAG Protein sequence : MAAFEYKALDKQGKQQKGVIEADTARHARSQLRDQQLMPLELSQVNEKESKAGGQGFSLFKRGIPVADLALITRQIATLV AAGLPIEEALKAVGQQSEKDRLGSMIMAVRSRVVEGYSLADSLAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTER RQQLKSKLTQAMIYPVVLTLVAIGVIGVLLAAVVPKVVGQFEHMGQELPGTTQFLILASDFVQSYGVLVIGLIVLLSIGL QRLLTKPLYRMKWDTLLLSMPVIGKVSKGLNTARFARTLSILSASSVPLLDGMRIASEVLQNVKVRAAVDEATARVREGT SLGAALTQTKLFPAMMLYMIASGEKSGQLENMLERAADNQDREFEANVNIALGVFEPMLVVSMAAVVLFIVMAILQPILE LNNLISG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-101 | 57 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-100 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sden_0123 | YP_561143.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-99 | 56 |
| Sden_0123 | YP_561143.1 | general secretion pathway protein F | VFG0181 | Protein | 8e-92 | 50 |
| Sden_0123 | YP_561143.1 | general secretion pathway protein F | VFG1870 | Protein | 5e-84 | 44 |
