Gene Information

Name : Sden_1145 (Sden_1145)
Accession : YP_562154.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 1316500 - 1317153 bp
Length : 654 bp
Strand : +
Note : catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine

DNA sequence :
ATGTTTACCGGAATAATCGAAGCCCTAGGGACATTAACTAAGATTGAGCGCCACGGTCAGGATATTCGCCTCACTGTGGA
TAGCGGCAAGCTTGACTTAAGTGATGTTAAACTCGGTGATAGCATTGCCACTAATGGCGTGTGCCTAACTGTCGTTCAGA
GCCTTAAACAGGGGTACATGGCCGACGTGTCTGCAGAAACTGTGGCATTGACAGGCTTTGCTCGCTATAAAGTGGGCCAG
AAGGTTAATCTTGAAAAAGCCCTTACCGCCACCACACGTTTAGGCGGCCACATGGTCAGCGGTCATGTGGATGGCATGGC
AGAGGTGATGCAGCGACAAGCTCGTGGCAAGGCCATCGAGTTTTGGTTAAAAGCGCCCAGTGAGCTTGCCCGCTATATTG
CCCATAAAGGTTCAGTGACCATAGATGGCGTTAGTCTTACGGTTAATGAAGTCGATGGTGATAATTTCAGGCTCACTATC
GTGCCGCACACTGCTGGCGAAACCACACTATTAGATTTAAACACGGGTGACAGGGTAAACCTTGAAGTGGATCTTATCGC
CCGCTACCTTGAGCGTTTGATGGGGGCGAAAGCACCTTCGGCCGAAGGCGGCGTGACCATGGAGCTACTGGCACGCTCAG
GATTTATGAAATAG

Protein sequence :
MFTGIIEALGTLTKIERHGQDIRLTVDSGKLDLSDVKLGDSIATNGVCLTVVQSLKQGYMADVSAETVALTGFARYKVGQ
KVNLEKALTATTRLGGHMVSGHVDGMAEVMQRQARGKAIEFWLKAPSELARYIAHKGSVTIDGVSLTVNEVDGDNFRLTI
VPHTAGETTLLDLNTGDRVNLEVDLIARYLERLMGAKAPSAEGGVTMELLARSGFMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 2e-46 51
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 2e-46 51