Gene Information

Name : Sden_1139 (Sden_1139)
Accession : YP_562148.1
Strain : Shewanella denitrificans OS217
Genome accession: NC_007954
Putative virulence/resistance : Unknown
Product : glycine betaine/choline/proline transport system permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1309903 - 1310214 bp
Length : 312 bp
Strand : +
Note : -

DNA sequence :
ATGACCAGAAAAAGCGCAGTCCATATCAGCCCTCTTCAAAAATTAGAATATGCCAAGCTGATGGTCGAACAGGGTTACAC
CAACAAGCAAATTGAAGATATGTCAGGTGCCGGTAAATCTGCGGTGTCTAGATGGAAAGTGCAGTATCAAGCTGAATTAG
CCGGTGAAACCCCAGAAAATGCCAAAGCATTAACTGAAGACCAACGAAGAATACAGCTTCTAGAAGCCCAACTAAAACAA
GCCATGAGGGATAATGATATCTTAAAAAAGGCTGCAGCTTTCTTCATTCGAGACAATCAAAACTTAAAATGA

Protein sequence :
MTRKSAVHISPLQKLEYAKLMVEQGYTNKQIEDMSGAGKSAVSRWKVQYQAELAGETPENAKALTEDQRRIQLLEAQLKQ
AMRDNDILKKAAAFFIRDNQNLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG13 AAN62235.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-08 45
trp1329A CAB46577.1 IS1329 transposase A Not tested HPI Protein 7e-11 44
tnpA CAB61575.1 transposase A Not tested HPI Protein 6e-11 44
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 7e-08 42