|
Name : pbpG (Sden_1095) Accession : YP_562106.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : D-alanyl-D-alanine endopeptidase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1686 EC number : - Position : 1255974 - 1256870 bp Length : 897 bp Strand : + Note : specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7 DNA sequence : ATGAAAAATCGTCTTTTATCAAGTTCATTACGCCGTGTATTAGTTAAGCCACTGGTACTCGGGGCAATATTATTTTGCCT ATCCCCCCATATTTATGCAGCTCAACAAGAATTAGCCTCAACCAGTGGCATGCTGGTGGACTTAAATACCGATGAAGTCC TGTATGCCAGCAATCCAGACAGGGTAATGCCGATTGCGTCAGTCACTAAGTTGATGACCGCCATGGTCACCTTAGATGCC AAACTGCCTTTAGAACAAAAAATAAGCATAAAAATAAATGAAACCAAAGAGATGCGCAATGTCTATTCAAGGGTGCGTAT AGGCAGTGAACTGTCTCGTAAGGACATGTTATTACTGGCATTGATGTCCTCTGAAAACCGCGCCGCCGCAAGTCTTGCGC ATCATTATCCAGGGGGCTACGCCGCCTTCATTCGTGCCATGAATGACAAAGCCAAAGCCTTAGGGATGACGAAATCAAGT TTCGTTGAACCGACTGGATTGTCTCGTAAAAACGTCTCTAGCGCTAGAGACCTAGTTATGTTGCTCAAAGCCAGCGAAGG CTACCCTTTGTTGGGTGAGTTAAGCTCGACGGATAAGAAAACGGTGACCTTTAGCAATCCTTGGTACAAGTTAGATTTTC GAAATTCCAATCGTTTAGTGTTTAAAAATGATTGGAACATACAATTAACCAAAACTGGTTTTACCAATGATGCTGGCCGC TGTCTTGTGATGCGCACCGAGATGAATAAGCGCCAGGTGGCCTTCGTGGTGCTGGATGCTTTCGGTAAGCTTACCCATCT GGCCGATGCCAATCGTTTACGTAATTGGCTTGAAACTGGCAAGGTAACGCAAATACCCACAGCGGCTAAACAATATAAGC AGCAGCGTCTTCGTTAA Protein sequence : MKNRLLSSSLRRVLVKPLVLGAILFCLSPHIYAAQQELASTSGMLVDLNTDEVLYASNPDRVMPIASVTKLMTAMVTLDA KLPLEQKISIKINETKEMRNVYSRVRIGSELSRKDMLLLALMSSENRAAASLAHHYPGGYAAFIRAMNDKAKALGMTKSS FVEPTGLSRKNVSSARDLVMLLKASEGYPLLGELSSTDKKTVTFSNPWYKLDFRNSNRLVFKNDWNIQLTKTGFTNDAGR CLVMRTEMNKRQVAFVVLDAFGKLTHLADANRLRNWLETGKVTQIPTAAKQYKQQRLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00303 | YP_008207768.1 | D-alanyl-D-alanine carboxypeptidase | Not tested | AbaR25 | Protein | 3e-44 | 43 |
| BJAB0868_00307 | YP_008211633.1 | D-alanyl-D-alanine carboxypeptidase | Not tested | AbaR26 | Protein | 3e-44 | 43 |
