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Name : Sden_1083 (Sden_1083) Accession : YP_562094.1 Strain : Shewanella denitrificans OS217 Genome accession: NC_007954 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1239191 - 1241185 bp Length : 1995 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTCTTCCCGTAAAGTACTCGCTAACGCTATCCGTGCATTAAGTATGGATGCAGTTCAAAAAGCCAATTCAGGTCACCC TGGTGCACCTATGGGTATGGCTGATATCGCCGAAGTGCTTTGGAATGATTTCCTTAAGCACAACCCGACGAACCCTGAGT GGGTCGATCGCGATCGTTTTATTTTATCAAACGGTCACGGCTCTATGCTGATTTACTCTTTACTGCACCTAAGCGGTTAT GCTTTGCCAATCGAAGAGCTAAAGCAATTCCGTCAGCTACATTCTAAGACTCCAGGCCACCCTGAATACGGTTACACCCC AGGTGTTGAAACCACCACTGGCCCATTAGGCGCAGGTATTAGCAACGCGGTCGGTATGGCCATTGCTGAAAAAACCTTAG CGGCGCAGTTTAACCGTGAAGGCCATGATATCGTCGATCACTTTACTTACTGTTTCTTAGGTGATGGCTGTTTAATGGAA GGCATCTCCCACGAGGCCTGTTCATTAGCGGGCACCTTAGGCTTAGGCAAGTTAATCGCATTTTGGGATGACAACGGCAT TTCAATCGATGGTCATGTTGAAGGCTGGTTCACCGACGATACCCCTAAGCGTTTCGAAGCTTATGGCTGGCACGTGATTG CTGGCGTGGATGGTCACGACCCAGAAGCCATTAAAGCGGCAATCAATGAAGCTAAGTCGGTCACCGATAAGCCAAGCATG ATTTGCTGCAAAACCATTATTGGTTTTGGTTCGCCAAACAAGTCTGGCAGCCATGACTGTCACGGCGCGCCACTCGGAGA CGCTGAAATTGCTGCAGCGCGTGAATTCCTAGCTTGGCCACATGCCCCATTCGAAATCCCAACAGACGTATATGCAGGAT GGGATGCCAAAGAAAAAGGCCAAGCGATTGAAGCGGCTTGGGAAAGCAAGTTTGAAGCCTATAAAGCGGCTCACCCAGCA CTGGCTGCTGAGTATGAGCGCCGCGTGTTAAAAGGTGACTTACCCGCAGATTTTGAAGCCAAGGCTCAAGCCTTCATTCA AGAGTGTCAAGATAAAGGCGAAGGCATTGCTAGCCGTAAAGCCTCGCAAAATGCTATCGGCTTCTTTGGTGCTATGTTGC CAGAGTTGTTAGGCGGCTCTGCGGATTTAGCCGGTTCTAACTTAACCTTATGGTCAGGTTCTAAAGGCATTCAAGACGAT GCTGCCGGTAACTACATCTATTACGGTGTGCGTGAATTTGGCATGAGCGGCATCATGAATGGCGCGTCATTGCACGGCGG TTTCATCAACTACGGCGCGACCTTCATGATGTTTATGGAATACGCCCGTAATGCGGTACGTATGTCTGCGCTGATGGGCA TTCAGAACATCTTCGTTTATACCCATGATTCTATCGGTCAAGGCGAAGATGGCCCGACTCACCAACCAGTTGAGCAGCTA GCTAACTTACGCATGACGCCAAATATGGCAGTATGGCGCCCCTGTGATGCCGCTGAAACAGCGGTATCTTGGAAAGCGGC TATCGAGCGTCGTGATGCACCAACGTCACTGATTTTCAGCCGTCAAAACCTGAAAGCTCAAGCCCGCACGCCTGAGCAAT TAGCTAACGTTGCCAAAGGCGCTTATGTGCTACTCGATTGCGCTGGCACAGCCGATGTCATCTTAATGGCGACGGGTTCT GAAGTGCAGCTTGCAATAGAAAGTGCTGCAGCATTAACCGAGCAAGGCGTTAAGGTGCGTGTTGTGTCTATGCCATCAAC CACAGAGTTTGATAAGCAAGACATCGCTTACAAAGAGTCTGTATTGCCAAAAGTTGTGACTAAGCGTGTAGCCATTGAAG CGGCACATGTGGATTTCTGGCACAAGTACGTGGGCTTTGGCGGCGCTATGGTTGGTATGACGACCTTTGGTGAGTCAGCC CCAGGTGGTGACTTGCTTAAGCACTTTGGTTTCACCGTCGATAACGTAGTGGCGACAGTGAAAAGCTTAGGCTAA Protein sequence : MSSRKVLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTNPEWVDRDRFILSNGHGSMLIYSLLHLSGY ALPIEELKQFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNREGHDIVDHFTYCFLGDGCLME GISHEACSLAGTLGLGKLIAFWDDNGISIDGHVEGWFTDDTPKRFEAYGWHVIAGVDGHDPEAIKAAINEAKSVTDKPSM ICCKTIIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLAWPHAPFEIPTDVYAGWDAKEKGQAIEAAWESKFEAYKAAHPA LAAEYERRVLKGDLPADFEAKAQAFIQECQDKGEGIASRKASQNAIGFFGAMLPELLGGSADLAGSNLTLWSGSKGIQDD AAGNYIYYGVREFGMSGIMNGASLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL ANLRMTPNMAVWRPCDAAETAVSWKAAIERRDAPTSLIFSRQNLKAQARTPEQLANVAKGAYVLLDCAGTADVILMATGS EVQLAIESAAALTEQGVKVRVVSMPSTTEFDKQDIAYKESVLPKVVTKRVAIEAAHVDFWHKYVGFGGAMVGMTTFGESA PGGDLLKHFGFTVDNVVATVKSLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 72 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 66 |
