Gene Information

Name : Bxe_C0450 (Bxe_C0450)
Accession : YP_555704.1
Strain :
Genome accession: NC_007953
Putative virulence/resistance : Virulence
Product : putative Type IV secretion system protein VirB4/TraE
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 468909 - 471380 bp
Length : 2472 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGCACAGCCGCAACTCATCGAGGTGGCCGAACGTGAGGTGGTGCTCGCGGACTTTGTCCCGTTTTCGTCGCACGT
GACCGATCACGTGATCCGCACGCGGGAAGGGGATTACCTGAGTGTCTGGAAGATCGCGGGCATTGCCTTCGAGGCGGCCG
ATCCAGGCGACATCCTCGTGCGTCACGAAGGATTCAACCAGCTCGTGCGCAGCCTGCCGGGAGGTCACGTCGGCCTGTGG
TCGCACCGGATCCGCCGGCGCGTGACGGACCACTTTGCGACGCCGTACGGCCACCCGTTCTGCCAGGAGCTCGCCACGCG
CTACTACGCGAGCTTTGCGGGCTACCGGATGATGGCCAACGAACTGTACCTGACGCTCGTGTACCGGCCGCGCCGCACGC
GCCTGGGGCGTCTTTTCAGCCAGGCGGCGCGGCGGACCCTCGATGATATTCGGCGGGACCAGCACGAGGCCCTGAAGGTG
ATGGCGGAGCTTGCCGCGCAGGTCGAATCGGGCCTTAAGCCCTGGGACCCGGTGGCGCTTGGTGTCTACAGGAAGCAGAT
CCGCTACACGCAGCGCCCCGTGCGTTTCTCCGCGGCGCTGGAGTTCCTGGGCTATCTCGTCAACGCCGCATGGGAGCCCG
TGCCGGTGCCGTCTGGCCGCATTGCCGAGGCACTGCCGACGTCGCGGCTTTTCTTCCGCACCGAGAAGGTCGAGATCCGC
ATGGCCGATGCGACGCGCTACGCCGCGTTGCTCGACCTGAAGGACTACCCCGAGGAAACCGAGCCGGGGATGCTCGACGG
TCTGCTCTATGGCGACTTCGAATACATCGAGACCCAGAGTTTCACGATCCTTGACCGTCCCACGGCAAAAGAGGCACTCG
AGCGTCAGCGCAACCAGATGATTGCTGGCGAGGACGTGGCGGTCTCGCAGGTCCAGGCTATGGACCAGGCGCTGGACGAT
CTGATCAATGGTGATTTCGTCCTCGGTGAATATCACTATTCGCTCGCGGTGCTCGGTGACAGGCCCGACGAGGTCGCGCG
GCATGTGGCGAAGGCGCGCACACAACTCGCGGACGTGGGCTTCCAGACGGCGCTGGTCGATCTGGTAGCGGATGCGGCCT
GGTTCGCGCAGCTGCCTGGTAACTGGCGCTACCGGCCACGGGAGGCGAAGCTCACCTCGCGCAACTTCTGCGGACTCGCG
AGCCTGCACAACTTTGCGACCGGCAAGCGCGAAGGCAATCCGTGGGGCGAGGCGATCACGATCGTGAAGACGCCGAGTGG
GCAACCGCTGTACCTGAACTTCCACGCCACGCCGGAGAAGAAGGAGTCCGCTGACGAGAAGGCGCTCGCCAACACGCAGA
TCATCGGACAGGCGGGTGCCGGCAAGACGGTGTTGGAGCTGTTCCTGCTGGCAATGGCGATGAAGTATGGCCTCACCGGC
GTCGTCTACGACAAGGACCGGGGCACTGAGATCGCGATCCGGGCGATGGGAGGCCGCTACACGGTGTTTCGACGGGGTGT
CCCGACGGGATTGAATCCGTTCCAGCTCGACCCGGACGAGACGGTACTGGACTTCTGGGAGCGGCTCGTGCGCCGTCTGG
TCGACACCGGCACGCTGTTGTCGGCGAAGGACGAACTCGACATTTCGCGTGCAGTGCGGGAAGTCGCCCGCATGGAGCGC
CCGTTGCGCCGCCTGTCGATGGTCCGGCAATTGCTGCCCGCCGTGGGCGAAAACAGCCTGCATGCACGCCTCACGAAGTG
GTGCGCAGGCGGACGACTCGGCTGGGTGCTGGACAACCCGTCGGACCTGCTGGATTTCAGCCAGAACCGTCTCTTCGGCT
TCGACGATACGGAGCTGCTCGACGATCCGGAGGTGTCGACGCCGGTCACGATGTACCTGTTGCAGCTGACCGAAAGCCTG
ATCGACGGGCGGCGCTTTGTGTATGTGATGACCGAATTCTGGAAGCGCCTGGGCGATCCGGTCTTCACGGATTTCGCAAA
GGACAAGCAGAAGACGATCCGCAAGCAGAACGGTCTGGGGATCTTCGACACGCAATCCCCAGCCGATGTACTGCGTAGCG
ACATCGCGCGGGCGCTGGTCGAGCAGACCGCCACGTTCTTCTTTCTGCCGAATCCGCGTGCCGACTACGACGACTACGTG
CATGGCTTCAAGCTGACCGAGGCCGAATTCAACATCGTCCGCTCACTCGGCGAGAACAGTCGCCTGTTCCTTGTGAAGCA
GGGCCACCGTTCGGCCATCGGCAGGCTGGATCTGGCCGGCCTCGGTGACGTGCTCGACGTGCTGTCGGGGACGACGGACA
ACGTTGAGCTGCTCGACGGGATCCGTGCCGAAGTGGGCGACGATCCCGGCGTGTGGCTCCCCGTGTTTCATGAGCGGCTG
GCGAAGCGTCGTGCGACCGGGGGCGCCCTGAATGCACTGACGCCGCGTCTGTCGGGAAGAGGTGCACGATGA

Protein sequence :
MSAQPQLIEVAEREVVLADFVPFSSHVTDHVIRTREGDYLSVWKIAGIAFEAADPGDILVRHEGFNQLVRSLPGGHVGLW
SHRIRRRVTDHFATPYGHPFCQELATRYYASFAGYRMMANELYLTLVYRPRRTRLGRLFSQAARRTLDDIRRDQHEALKV
MAELAAQVESGLKPWDPVALGVYRKQIRYTQRPVRFSAALEFLGYLVNAAWEPVPVPSGRIAEALPTSRLFFRTEKVEIR
MADATRYAALLDLKDYPEETEPGMLDGLLYGDFEYIETQSFTILDRPTAKEALERQRNQMIAGEDVAVSQVQAMDQALDD
LINGDFVLGEYHYSLAVLGDRPDEVARHVAKARTQLADVGFQTALVDLVADAAWFAQLPGNWRYRPREAKLTSRNFCGLA
SLHNFATGKREGNPWGEAITIVKTPSGQPLYLNFHATPEKKESADEKALANTQIIGQAGAGKTVLELFLLAMAMKYGLTG
VVYDKDRGTEIAIRAMGGRYTVFRRGVPTGLNPFQLDPDETVLDFWERLVRRLVDTGTLLSAKDELDISRAVREVARMER
PLRRLSMVRQLLPAVGENSLHARLTKWCAGGRLGWVLDNPSDLLDFSQNRLFGFDDTELLDDPEVSTPVTMYLLQLTESL
IDGRRFVYVMTEFWKRLGDPVFTDFAKDKQKTIRKQNGLGIFDTQSPADVLRSDIARALVEQTATFFFLPNPRADYDDYV
HGFKLTEAEFNIVRSLGENSRLFLVKQGHRSAIGRLDLAGLGDVLDVLSGTTDNVELLDGIRAEVGDDPGVWLPVFHERL
AKRRATGGALNALTPRLSGRGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwK YP_001610476.1 TrwK protein Virulence Not named Protein 8e-175 45
trwK CAD42844.1 TrwK protein Not tested trw-PAI Protein 6e-175 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bxe_C0450 YP_555704.1 putative Type IV secretion system protein VirB4/TraE VFG2211 Protein 0.0 48
Bxe_C0450 YP_555704.1 putative Type IV secretion system protein VirB4/TraE VFG2259 Protein 1e-176 45
Bxe_C0450 YP_555704.1 putative Type IV secretion system protein VirB4/TraE VFG0018 Protein 1e-156 43