Gene Information

Name : Bxe_A1887 (Bxe_A1887)
Accession : YP_559130.1
Strain :
Genome accession: NC_007951
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP- binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2836731 - 2839616 bp
Length : 2886 bp
Strand : +
Note : -

DNA sequence :
ATGGCGGAACATCTTTGCGAACTTTGCGGTGTCAGACCGGCGACCATCCGGGTCGCGGTCATTCAGGGCGGCCGCAGAAG
GCAACTCGATGTTTGCGACTATCACTACGCGCAGCTCACGCGGCATCAACGGCAGGTGTCGCCGCTCGAATCGCTGTTTC
GGGGCGGCCTGTTCGAGGGATTGCTGGACTCGGGTATGGACGGCTCCGGCCCCGAACCCGCCGCCACGCGCCACGACGGC
CCGGTCAGCAAAGGCGTCGACCTGCAACAGCATTTCAGCGACCAGGCGAAGGAAATACTGCAACGCGCCGCCGAACGCGC
CGTGCAATTCGGCCGTCACGAAGTGGACACCGAACACGTGCTCTATGAACTCGTCGAAAGCGAAGCAGTACAGCGCATTC
TGTCGGCGCTGAAGATCTCCGCCAGCGACCTTCAGAAGCATATCGAAGCAAACGCGCCCAAAGGACACGCCACGTCGAAA
GCGCCGCAAGGCGAGATTTCCGTTTCGCCGCGCCTGAAGAGTGCGCTTGAACGCGCGGTTATCGCGTCGCGCGAATTCGG
ACAGAACTACGTCGGGCCCGAACATATTCTCACCGGCCTCGCCGAAGTCACCGACAGTTTTGCCGGCGATCTGTTGATGA
AGTATGGCCTGTCGTCTCACCAGTTGCGTCAGCAGACGTTGAAACAGGCCGGCCAGGAAGAAGCCGCACAGGCGCCCAGC
AACACGCCGCAGCTCGACAAATACAGCCGCGACGTCACGCGGCTCGCCCGTGAAGGCAAGCTCGATCCGGTGATTGGACG
ATCGAAGGAAACCGAGACGCTCGTCGAGGTGCTGGCCCGCCGCAAGAAGAACAACCCCGTGCTGATCGGCGAGCCCGGCG
TCGGCAAGACCGCGATTGTCGAGGGCCTCGCGCAGCGCATGATCAGCGGCGACGTGCCGGAAACGCTGCGCGAAAAACGC
CTGATCGAACTCAATGTCAACTCGCTGGTCGCGGGCTCGAAATACCGCGGCGAATTCGAGGAACGCGTCAGGCAGGTGAT
GGACGAAATCGCCGCGCACAAGGATCAGCTGGTCCTCTTCGTCGATGAAGTGCACACCATCGTCGGCGCGGGCCAGGGCG
GCGGCGAAGGCGGCCTGGATATTGCCAACGTGTTCAAGCCGCCGATGGCGCGCGGCGAGCTCAACCTGATCGGCGCGACC
ACGCTCGCCGAGTACCAGAAGTACATCGAGAAAGACGCCGCGCTGGAACGGCGCTTCCAGCCCGTGCTGGTCGGCGAGCC
GAGCGTGGAGCAGACCATCGGCATTCTGCGCGGGCTGCGCGACCGTCTGGAAGCGCACCACAAGGTCACGATCCTGGATG
AAGCGTGCGTCGCCGCCGCCGAACTGTCCGACCGCTACGTCACGGGCCGCTTCCTGCCGGACAAGGCCGTCGACCTGATC
GACCAGGCGGCCGCGCGCGAGCATCTGTCGTCCACATCGCGCCCGGCGGAGGTGCTGGAACTCGAATCGGAAATCGCCCA
GATCCGGCGCGAACAGGAATACGCGGCGTCGCACAAACAGTTCGAACGGGCCACGGCGCTCGGAGAGCAACTGTCCGGCA
AGCAAACCCGGCTCGACGACGCGACCCAGGCATGGAAGCGGCGCGTGAGTACGAGCACCGCGGAGGTGACCCGTACGCTG
GTCGCCGAAATCGTCGCGAAGATGACGGGCATTCCGGTTGCCGACCTGACGCAGGAAGAGAAAACCAGACTGCTGCAAAT
GGAGGACCGCCTGCACCGGCGCGTGATCGGCCAGGAAGAAGCGATCAGCGCGGTAAGCGATGCGGTGCGGCGAAGCCGCG
CGGGTTTGCAGGCCCGCCATCAGCCGCTCGCCGTGTTTCTGTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAACTGGCC
AAGGCGCTCGCCGAAGTCGTATTCGGCGACGAGGACGCCATTGTGCGTATCGACATGAGCGAGTACATGGAGCGGCACGC
GGTGGCGCGACTGATCGGCGCGCCGCCCGGCTATGTCGGCTACGACGAAGGCGGCCAGCTGACCGAGCGCGTGCGGCGGC
GTCCGCATAGCGTGATTCTGCTCGACGAAATCGAAAAGGCGCATCCGGACGTCTACAACGTGCTGCTCCAGGTATTCGAC
GACGGCCGCCTGACCGACGGCAAGGGCCGCGTCATCGACTTCGCCAATACGCTGATCATTGCGACCAGCAATCTCGCCTC
CGACGTCATCATGGGCACGCCGCGCAAGCGTCCCGGCTTCATCGCCGCGGACAACGACCTCGCCGCCGACAAGGGCGCCC
GCAAGGACCGCCAGCCGGACGGCGTGCGCGAAGGTGTGATGACGGTGCTGCGGTCCCATTTCCGGCCCGAGTTCCTGAAC
CGTATCGACGAGATCATCATTTTCGAATCGCTGAACGCCGACCAGATCCGTTCGATCGTGCGCCTGCAACTCGACAAGGT
CGCGCACATCGCGAAGAGTCAGGATATCGACATCGTGTTCGACGACAGTATCGTCGATCAACTGGCGAAGGAGGCTTACC
GGCCCGAATATGGCGCGCGTGAGTTGCGGCGGCGCATCCGCCAGGTCATCGAGAATCCGCTGGCAAAGCAGATGCTCGAC
GGCGCGGTCCGCGAGGGCAACCGCGTGGTGTGCCGGTTCGATCCGCTCGCGGACGATACGGTGTTCGAACTGGGCGAAGC
ACCGCAGCAGGAGCTCGCCGGCACAACGCAGCAGCAAGACCAGAAAGACCCGGAAGCCGGCAATGGTGCGGCTGACGCCG
GACCGGCCGCGAAACCCGCGCGCAAGCGTGCCAGCCCGGCGCGCAAGCGCGGCAACACGGACGGCGGCGACCACGCCGCG
GGATAA

Protein sequence :
MAEHLCELCGVRPATIRVAVIQGGRRRQLDVCDYHYAQLTRHQRQVSPLESLFRGGLFEGLLDSGMDGSGPEPAATRHDG
PVSKGVDLQQHFSDQAKEILQRAAERAVQFGRHEVDTEHVLYELVESEAVQRILSALKISASDLQKHIEANAPKGHATSK
APQGEISVSPRLKSALERAVIASREFGQNYVGPEHILTGLAEVTDSFAGDLLMKYGLSSHQLRQQTLKQAGQEEAAQAPS
NTPQLDKYSRDVTRLAREGKLDPVIGRSKETETLVEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMISGDVPETLREKR
LIELNVNSLVAGSKYRGEFEERVRQVMDEIAAHKDQLVLFVDEVHTIVGAGQGGGEGGLDIANVFKPPMARGELNLIGAT
TLAEYQKYIEKDAALERRFQPVLVGEPSVEQTIGILRGLRDRLEAHHKVTILDEACVAAAELSDRYVTGRFLPDKAVDLI
DQAAAREHLSSTSRPAEVLELESEIAQIRREQEYAASHKQFERATALGEQLSGKQTRLDDATQAWKRRVSTSTAEVTRTL
VAEIVAKMTGIPVADLTQEEKTRLLQMEDRLHRRVIGQEEAISAVSDAVRRSRAGLQARHQPLAVFLFLGPTGVGKTELA
KALAEVVFGDEDAIVRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPHSVILLDEIEKAHPDVYNVLLQVFD
DGRLTDGKGRVIDFANTLIIATSNLASDVIMGTPRKRPGFIAADNDLAADKGARKDRQPDGVREGVMTVLRSHFRPEFLN
RIDEIIIFESLNADQIRSIVRLQLDKVAHIAKSQDIDIVFDDSIVDQLAKEAYRPEYGARELRRRIRQVIENPLAKQMLD
GAVREGNRVVCRFDPLADDTVFELGEAPQQELAGTTQQQDQKDPEAGNGAADAGPAAKPARKRASPARKRGNTDGGDHAA
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-168 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bxe_A1887 YP_559130.1 ATP-dependent Clp protease, ATP- binding subunit VFG0079 Protein 0.0 49