Gene Information

Name : Bpro_5448 (Bpro_5448)
Accession : YP_552200.1
Strain :
Genome accession: NC_007950
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 199588 - 201150 bp
Length : 1563 bp
Strand : -
Note : -

DNA sequence :
ATGTTGACACTGGCTAAATCACCTGGACAAATGGCACCCACTGCCATAAAGCCTATCTCTGCATCGGCAGATCTGAACAA
ACTGGTCTATTTTGATCGGGAAGCCGGTCGGCTTCTGGTGTCGAAGGATCACTTCTTCAATGCGACTGTTCGTAGCTACA
CCGAGCGCGTAAAGGGCGAGTGCGCCAAGGGTGGTCTACCACCTCCGGTGGTGCAGCAAGTCGCGATGGACGTCATTGCA
AAGATGCATCACGACAATTCGCACGCTGATGAGTTCGTCGCGCAAGCAAGTGAGATGCAGAAGGCTGCCAAGACGGTGTT
CAAAAAGGCGGTGGAGCGCCGGGCATCGGATATTCACATTCGAGTCTTCAACAAAGGTGGCACGAAGGTATTCTTCCGAA
TTCACAACGATTTGCATCTTGTGCAAGAAGACACTGCGACTTGGGGCCACCTCATGTGTTCCGCTATTTACACGTCGATG
TGTGACGTCGCAGATGCGACATTTGACGTGAACAATCGTCAAGATGCGCGCATCTCTGAGCGGGACAAACTTCCCCCGGG
CCTGGACGGCATTCGGGTAGCTACCACGCCGCAGGTTGACGGCAATGTCATGGTACTTCGCCTGCTCTATAACGACGCGG
ATAAGTCGACTGATATATGTGCCCTTGGATATGAGCCGCAACAGAAGGCCCAGGTTGATTCCATGAAGCGCAGGCCCACG
GGGATCAACATTATTTCCGGGCCTACTGGTTCGGGCAAATCCACCACTCTGCAGCGAACCCTTCTGTCAATCCATTCGGA
GTGCAATGGGCAAAAGCACATCATCACAGTAGAAGACCCGCCTGAATACCCGATGCCAGGCATCGTGCAGACGCCAGTCG
CTAATGCTGAAACCGAAGAAGACCGGTCAAATGCTTTTCAGGCCGCGATCAAAGCAACCATGCGGCTTGACCCGAATATC
ATCATGATCGGTGAGATGCGCGATACGCCCTCAGTGCAACTCGCCGTAAGAGCAGCAATGACTGGCCATCAGGTCTGGTC
CACGGTTCACGCCAACAATGCCTTTGCGATCATCGACCGCATGGTGGACTTGGGCGTTTCGTTGAACATCATGGCGGATC
CGTCCATTGTCACGGGCATGATTTGTCAGAGGTTACTGAAAGTTCTTTGCCCTCACTGCAAGAAGCCATTGAGAGAGGTC
ATTGACAACTTCAGCCACGAAGATCAGATGCGTGTGATGGGGTCAATCGACGTGGCAAGTGCCCAGGTGCATGTGGCAGG
CACCGACTGTGAACACTGTTCGGGAAGTGGCGTAGCTGGCCGCACAGTGGTTGCCGAAGTCGTCGTGCCCGATCACAAAC
TCATGGATCTCATTCGTAAAGGGGATCGGCAATTAGCAATCGATTATTGGCGGTCCACTGGCGGCAGCTCAATGTTGGAG
CAGGCGATCATCAAGATCAACAGGGGACTAGTTGACCCGTTTCGGGCTGAGGAGGAGGTTGGACCGTTGAATCTGCTCCC
GGAGCCGGCGCTAGGGCGGGAGGTTGCATCCCATGAATCTTGA

Protein sequence :
MLTLAKSPGQMAPTAIKPISASADLNKLVYFDREAGRLLVSKDHFFNATVRSYTERVKGECAKGGLPPPVVQQVAMDVIA
KMHHDNSHADEFVAQASEMQKAAKTVFKKAVERRASDIHIRVFNKGGTKVFFRIHNDLHLVQEDTATWGHLMCSAIYTSM
CDVADATFDVNNRQDARISERDKLPPGLDGIRVATTPQVDGNVMVLRLLYNDADKSTDICALGYEPQQKAQVDSMKRRPT
GINIISGPTGSGKSTTLQRTLLSIHSECNGQKHIITVEDPPEYPMPGIVQTPVANAETEEDRSNAFQAAIKATMRLDPNI
IMIGEMRDTPSVQLAVRAAMTGHQVWSTVHANNAFAIIDRMVDLGVSLNIMADPSIVTGMICQRLLKVLCPHCKKPLREV
IDNFSHEDQMRVMGSIDVASAQVHVAGTDCEHCSGSGVAGRTVVAEVVVPDHKLMDLIRKGDRQLAIDYWRSTGGSSMLE
QAIIKINRGLVDPFRAEEEVGPLNLLPEPALGREVASHES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilQ2 AAP84207.1 PilQ2 Virulence PAPI-1 Protein 5e-66 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpro_5448 YP_552200.1 type II secretion system protein E VFG2432 Protein 1e-85 46