Gene Information

Name : Bpro_5095 (Bpro_5095)
Accession : YP_551864.1
Strain :
Genome accession: NC_007949
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter- DctM subunit
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 208316 - 209605 bp
Length : 1290 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGCCATCCTGGGTATTAGTTTTGTTGGGCTGATGGTGATCGGCCTTCCAATCGCCTTCGCGATGCTGATCGCCGG
ACTCGTTGCCATCTGGATGAAACCGGGGCTGAGCGGGCTGATCGTCATCCAGAACCTGTTCAGCGGTCTGGACAGCTTTC
CGCTGCTGGCGATTCCGTTCTTCATCCTGGCCGCCGAACTCATGTCTGGCGGTGCGCTGACCGACGTGCTGCTGCACTTC
GCGGCACGTCTTGTTGGCCGCCGGCGAGGTGGCTTGGGCCATGCCAACATCCTGACGCTGACCTTCTTCTCCGGGATCAG
CGGCTCGGCACTCGCCGATGCCGCAGGACCCGGCGCGATGCTGATCAAGATGATGCGCAAGGCGGGTTACAGCGCGCCTT
ACGCGGCAGCGCTCACGGCTTCCACCGCCATTGTTGGTCCCATCATCCCTCCTTCGATCATCATGATCATCTATGCGCTG
ACAGACAACAGCGTGACGATTACCGGCCTCTTCCTGGCGGGTGTGGTGCCCGGACTGCTGATCGCGGGTTCCCTGGCCAT
CGTTAACCATATCGTGAGCGTGCGTCGCAACTATCGCTCCGCGCCGGAGCTGCTGGACCCGTCGCCGATCCTGAGACTTT
TCATACGGGCGCTGCCAGCATTGATGCTGCCTGCGATCATCCTGGGCGGGATCCACTTTGGGGTCTTCACGCCAACGGAG
GCGTCCGCAGCAGCGGTGCTGTATGCCCTGCTGGTGGGCCGCTTTGTATATGGCACGCTGACCATGGACAAGCTGCCTGC
CATCTTGTTCCGCACGGCGCTGATGACATCATCCATCCTGTTTATCGTCGCTACGTCGGCGGTGTTCGCCTGGGTGCTGA
CCGTGGGCCAGATCCCGCAGACCGTTGCGGCCTGGATCGCAGGCATGCAGCTGTCGCCGGGCATGCTGCTGCTGGCCATC
AATGTGCTGCTGCTGCTGGTGGGGATATTCATCGAACCGCTTCCCGGCGTCATGATCATGGTGCCCATCCTCGCGCCGCT
GGCGGACGCTGCCGGCCTGAATCCGCTGCACTTCGCAATCGTGGTGATCGTGAACCTCACGCTCGGAATGATCACGCCCC
CGGTGGGCGGTCTGCTCTTCGTTACTTCGATTGTCTCTGGCGTCCAGATGGGGCCCATGGTGCGCGAAGGCCGGCCCATG
CTCGTCGCACTGCTGATCGTGCTGGCGCTTCTCACTTTCTTCCCGGCTTTGTCCACCTGGCTGCCGGGCCTGCTGGGCTA
CAGGAACTAG

Protein sequence :
MSAILGISFVGLMVIGLPIAFAMLIAGLVAIWMKPGLSGLIVIQNLFSGLDSFPLLAIPFFILAAELMSGGALTDVLLHF
AARLVGRRRGGLGHANILTLTFFSGISGSALADAAGPGAMLIKMMRKAGYSAPYAAALTASTAIVGPIIPPSIIMIIYAL
TDNSVTITGLFLAGVVPGLLIAGSLAIVNHIVSVRRNYRSAPELLDPSPILRLFIRALPALMLPAIILGGIHFGVFTPTE
ASAAAVLYALLVGRFVYGTLTMDKLPAILFRTALMTSSILFIVATSAVFAWVLTVGQIPQTVAAWIAGMQLSPGMLLLAI
NVLLLLVGIFIEPLPGVMIMVPILAPLADAAGLNPLHFAIVVIVNLTLGMITPPVGGLLFVTSIVSGVQMGPMVREGRPM
LVALLIVLALLTFFPALSTWLPGLLGYRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-34 41
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-34 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpro_5095 YP_551864.1 TRAP dicarboxylate transporter- DctM subunit VFG1110 Protein 1e-34 41