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Name : Bpro_0953 (Bpro_0953) Accession : YP_547807.1 Strain : Polaromonas sp. JS666 Genome accession: NC_007948 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 975832 - 977238 bp Length : 1407 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCGCCCGAGAATCGGATTTATAGAAGTCCCGAAATACAATCCCCCCATGCTAGACATCAACCTGCTCCGCAAAGACCT GCCCTCGGCTATCGCCCGCCTGGAGATGCGCAAGAGCCCGCAAGCCTTCCTCAACGTGGAAGCGTTCCAGGCCCTGGAGG CCGAACGCAAAGCCCTGCAAATCCGCACGGAAGAGCTGCAGAGCCAGCGCAACACCCTGTCCAAACAGATCGGCCAGCTC AAGTCCAAAGGCGAGGACGCCAGCGCCATCATGGCGCAGGTGAGCGCCTCCAAGGCCGAGCTGGAGTCCTCCGCGGCCCG GCTCGACCAGATCCAGTCCGAACTGCAGGGCCTGCTGCTGGCGGTGCCCAATTTGCCGCACGAATCGGTGCCGCTGGGTA CCGACGAGCAGGGCAATGTCGAAGTGCGCAAATGGAGCCCGATCGAAGGGCCGGGCGGCGAGCCGCCGGCCTTTGCATTC GAGGTCAAGGACCATGTGGACGTAGGCCAGCCACTCGGGCTGGACTTTGAGCTGGGCACCAAGCTGACGGGTTCGCGTTT TACCGTGATGAAAGGCCAGCTCGCGCGCTTGCACCGCGCCCTGGCCCAGTTTATGCTGGACGTGCAGACGCTGGAGCACG GTTATACCGAGTGCTACACGCCCTACATCGTCAACGGCGACTCCTTGCGTGGTACCGGCCAGCTGCCCAAGTTCGAGGGG GATCTGTTTCGCGTGGAAGCTGGTTTGGGTTTGGCGACTGCTCATGACGAGCAGATCGCGGAGTTGACCAAACGCTCTTT GTATTTGATTCCCACGTCGGAAGTGCCGCTCACCAACTTCGTGCGCGACGAGATCGTGCCCGAGGCGCAGCTGCCACTGA AATTCACCGCCCACACACCGTGCTTTCGCTCCGAAGCCGGCAGCTATGGCCGCGACACCCGCGGCATGATCCGCCAGCAC CAGTTCGACAAGGTTGAAATGGTGCAGATCGTGCATCCGGAGAAAAGCTACGAAGCGCTGGAAGACATGACCGGCCACGC CGAAATGATTTTGCAAAAGCTCGGCCTGCCTTATCGCGTCATGTTGCTGTGCACCGGCGACATGGGGTTTGGCGCCAGCA AGACCTACGACCTGGAAGTATGGCTGCCGGCCCAGAGCACCTACCGCGAAATCAGTTCGATCTCCAACTGCGAAGCCTTC CAGGCGCGCAGGCTGCAGGCCCGCTTCAAGAACGCCCAAGGCAAAAACGAGTTCGTGCACACCCTGAACGGCTCCGGTCT CGCCGTAGGCCGCACCCTGGTGGCCGTGCTGGAAAATTACCAGCACGCCGACGGCACCGTCGAGGTGCCGTTGGTGTTGC AGCCCTATATGGGCGGCATGACGGTGCTTGCACCGTCGGCTGGGTAA Protein sequence : MRPRIGFIEVPKYNPPMLDINLLRKDLPSAIARLEMRKSPQAFLNVEAFQALEAERKALQIRTEELQSQRNTLSKQIGQL KSKGEDASAIMAQVSASKAELESSAARLDQIQSELQGLLLAVPNLPHESVPLGTDEQGNVEVRKWSPIEGPGGEPPAFAF EVKDHVDVGQPLGLDFELGTKLTGSRFTVMKGQLARLHRALAQFMLDVQTLEHGYTECYTPYIVNGDSLRGTGQLPKFEG DLFRVEAGLGLATAHDEQIAELTKRSLYLIPTSEVPLTNFVRDEIVPEAQLPLKFTAHTPCFRSEAGSYGRDTRGMIRQH QFDKVEMVQIVHPEKSYEALEDMTGHAEMILQKLGLPYRVMLLCTGDMGFGASKTYDLEVWLPAQSTYREISSISNCEAF QARRLQARFKNAQGKNEFVHTLNGSGLAVGRTLVAVLENYQHADGTVEVPLVLQPYMGGMTVLAPSAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-98 | 53 |
