Gene Information

Name : Bpro_4253 (Bpro_4253)
Accession : YP_551043.1
Strain : Polaromonas sp. JS666
Genome accession: NC_007948
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4480419 - 4481105 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGACCCTGCGGGTGCTGGTCGTGGAAGACGACCGGGAAATACGGGCGTTGATGCAGTCATCCCTCGCCGTGGAGGGGTT
TGACGTCCGGACCGCGGCCTCGCTGAGCGAGGCTGGCGCGCTGTTGCGCCACGACCCGCCCGATGTCATCGTTCTCGATT
TGGGGCTGCCCGACGGGGATGGCGTGCAACTGGTGCGCGAGGTGCGCCGGCAGCAGTCGGTGCCCATCATCGTGGTGTCG
GCCCGCCATCAGGAGGCGCAGAAAATCGCGCTGCTCGATGCGGGGGCGGATGACTACCTGACCAAGCCCTTCAGCGTGGG
CGAGCTGCTGGCACGCATCCGGGTTGCCCTGCGGCATCGCGGCACGGCGCTGGCCGCGGCCGTGACGGTGCATGAGCTGG
ACGATTTGCGCATTGACCTGGCGGCGCATGTGGTGCTGCGCGCCGGTGAAACCCTGCATCTCACGCCTACCGAATTCAAG
CTGCTGGCGCGCCTGGTGCGAAGCGCCGGCCGGGTGGTGACGCACCGGCAGCTGCTGGTCGACGTGTGGGGTCCTGAATT
CACCGAGCACACGCACTACCTGCGGCTCTACATGGCCCAACTGCGCGCAAAAATCGAGCAGGATCCGGCCGAGCCGCGGC
ATCTGCTGACCGAGACGGGGGTCGGTTACCGGCTGGCGGACGCCTGA

Protein sequence :
MTLRVLVVEDDREIRALMQSSLAVEGFDVRTAASLSEAGALLRHDPPDVIVLDLGLPDGDGVQLVREVRRQQSVPIIVVS
ARHQEAQKIALLDAGADDYLTKPFSVGELLARIRVALRHRGTALAAAVTVHELDDLRIDLAAHVVLRAGETLHLTPTEFK
LLARLVRSAGRVVTHRQLLVDVWGPEFTEHTHYLRLYMAQLRAKIEQDPAEPRHLLTETGVGYRLADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 9e-33 43
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 3e-33 43
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 3e-33 43
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 3e-33 43
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 3e-33 43
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 2e-33 43
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-44 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 7e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bpro_4253 YP_551043.1 two component transcriptional regulator VFG1390 Protein 4e-34 41